liulab-dfci / bioinfo-combio
The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/
☆91Updated 2 years ago
Alternatives and similar repositories for bioinfo-combio:
Users that are interested in bioinfo-combio are comparing it to the libraries listed below
- ☆48Updated 3 years ago
- ☆53Updated this week
- My youtube programming scripts☆51Updated 2 months ago
- coding exercise using TCGA immune infiltration data☆44Updated last year
- Check strandedness of RNA-Seq fastq files☆119Updated 2 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆111Updated last month
- Generate IGV style locus tracks from bigWig files in R☆155Updated 4 months ago
- Tutorials on accessing public reference and genomic data☆31Updated last month
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆126Updated 7 months ago
- website for the rnaseq course☆98Updated 3 months ago
- RNA-Seq analysis workflow☆104Updated 3 years ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆45Updated 2 years ago
- A short tutorial on how to use RSEM☆136Updated 4 years ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆74Updated this week
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆81Updated last week
- ☆59Updated 10 months ago
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆45Updated last month
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆101Updated 4 months ago
- published papers with a lot of data☆66Updated last month
- Discovering known and novel miRNAs from small RNA sequencing data☆145Updated 6 months ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 6 years ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated last year
- A list of alternative splicing analysis resources☆43Updated 4 months ago
- collection of notebooks with different cytoscape workflows☆49Updated 2 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 3 years ago
- ☆88Updated last month
- Estimation of Promoter Activity from RNA-Seq data☆51Updated 3 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆49Updated 5 years ago
- Step-by-step analysis pipeline for RNA-seq data☆105Updated last year