Nonnegative Linear Models (NNLM) and Nonnegative Matrix Factorization (NMF or NNMF).
☆84May 14, 2024Updated 2 years ago
Alternatives and similar repositories for NNLM
Users that are interested in NNLM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rcpp Machine Learning: Fast robust NMF, divisive clustering, and more☆122Apr 6, 2026Updated last month
- R package providing ViennaCL header files☆20May 29, 2019Updated 6 years ago
- ☆14Nov 2, 2017Updated 8 years ago
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆36Dec 30, 2024Updated last year
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆12May 21, 2025Updated last year
- Fast truncated singular value decompositions☆136Jan 27, 2026Updated 3 months ago
- Single-cell Case Control Analysis☆57Feb 26, 2026Updated 3 months ago
- sake☆29Feb 8, 2023Updated 3 years ago
- A reimplementation of the fastLm function of RcppEigen for big.matrix objects for fast out-of-memory linear model fitting☆13Jul 14, 2017Updated 8 years ago
- Multithreaded Gephi Force Atlas2 Layout in 2 or 3-d☆23May 8, 2020Updated 6 years ago
- R package for Byte Pair Encoding based on YouTokenToMe☆16Updated this week
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆77Feb 27, 2023Updated 3 years ago
- ☆11May 30, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A pipeline for Smooth-seq data analysis.☆10Sep 23, 2021Updated 4 years ago
- ☆20Feb 17, 2021Updated 5 years ago
- ☆16Oct 18, 2023Updated 2 years ago
- MRtree R implementation☆14Mar 1, 2023Updated 3 years ago
- An Expectation-Maximization algorithm to infer mutational signatures☆27Nov 16, 2016Updated 9 years ago
- Predicted cell-cell interactions of the aging mouse brain☆21Sep 24, 2019Updated 6 years ago
- NMF: A Flexible R package for Nonnegative Matrix Factorization☆153Mar 14, 2023Updated 3 years ago
- Benchmarking pipeline for single-cell perturbation prediction tools☆33Jul 11, 2025Updated 10 months ago
- Multi-subject Single Cell Deconvolution☆296Mar 4, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆107Aug 2, 2023Updated 2 years ago
- ☆16Feb 25, 2017Updated 9 years ago
- ☆10Apr 28, 2023Updated 3 years ago
- ACTIONet single-cell analysis framework☆45Sep 16, 2024Updated last year
- R package wrapper for the C++ header-only library Xsimd that provides parallelized math implementations using SIMD☆12Jan 22, 2026Updated 4 months ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆24Jun 10, 2025Updated 11 months ago
- R package for integrating and analyzing multiple single-cell datasets☆429Feb 4, 2026Updated 3 months ago
- Reconstruction of complex single-cell trajectories using CellRouter☆46Dec 14, 2018Updated 7 years ago
- Solvers for Large Scale Eigenvalue and SVD Problems☆45Mar 9, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Global Waddington-OT☆23Mar 25, 2025Updated last year
- Single cell network synthesis toolkit☆23Feb 15, 2021Updated 5 years ago
- Bitmap font tools for R☆13Oct 27, 2024Updated last year
- R package for clustering strings by edit distance using graph algorithms (connected components and edge-betweeness)☆15Mar 11, 2019Updated 7 years ago
- ☆59Mar 18, 2026Updated 2 months ago
- RcppProgress R package: An interruptible progress bar with OpenMP support for c++ in R packages☆31Jun 4, 2024Updated last year
- An R package implementing the UMAP dimensionality reduction method.☆365Mar 8, 2026Updated 2 months ago