zdebruine / RcppML
Rcpp Machine Learning: Fast robust NMF, divisive clustering, and more
☆107Updated last year
Alternatives and similar repositories for RcppML:
Users that are interested in RcppML are comparing it to the libraries listed below
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆79Updated last month
- Seurat meets tidyverse. The best of both worlds.☆159Updated 8 months ago
- plotthis is an R package that is built upon ggplot2 and other plotting packages.☆45Updated this week
- ☆94Updated last year
- Quantify and interpret divers of variation in multilevel gene expression experiments☆62Updated 3 months ago
- Implementation of the matrixStats API for sparse matrices☆54Updated 2 weeks ago
- Decorate a plot with associated information☆104Updated last month
- MSigDB gene sets for multiple organisms in a tidy data format☆74Updated this week
- An R package to create forestplots of measures of effects with their confidence intervals.☆59Updated 3 years ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 3 months ago
- Interactive Cytometry Data Analysis☆65Updated 3 weeks ago
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆37Updated 3 months ago
- ☆73Updated last year
- Fit Gamma-Poisson Generalized Linear Models Reliably☆112Updated last month
- Continuous integration for R packages. 🔀 Automates testing ✅, documentation website building 📦, & containerised deployment 🐳.☆79Updated last week
- An R package for multivariate adaptive shrinkage.☆90Updated 5 months ago
- Single-cell analysis with non-negative matrix factorization☆44Updated 5 months ago
- Raster geoms for ggplot2☆220Updated last year
- An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…☆107Updated 5 months ago
- Visualise Clusterings at Different Resolutions☆223Updated last year
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- An implementation of scale functions for setting axis breaks of a 'gg' plot.☆137Updated 2 months ago
- Clone of the Bioconductor repository for the basilisk package.☆27Updated this week
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆171Updated last week
- pathfindR: Enrichment Analysis Utilizing Active Subnetworks☆188Updated last month
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆25Updated 2 weeks ago
- Miscellaneous functions commonly used by 'YuLab-SMU'.☆33Updated last month
- "Orchestrating Spatial Transcriptomics Analysis with Bioconductor" book☆69Updated this week
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- ☆80Updated 3 weeks ago