jacquerie / biorxiv-cliLinks
A Python wrapper for the bioRxiv API.
☆10Updated 4 years ago
Alternatives and similar repositories for biorxiv-cli
Users that are interested in biorxiv-cli are comparing it to the libraries listed below
Sorting:
- ☆15Updated 3 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- Browser for ExAC consortium data☆12Updated 8 years ago
- Fishers Exact Test for Python (Cython)☆66Updated 10 months ago
- Python, R and Matlab implementation of Brown's Method to combine dependent P-values☆25Updated 7 years ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆41Updated 4 years ago
- A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list☆37Updated 2 years ago
- API providing access to papers and authors scraped from biorxiv.org☆56Updated 2 years ago
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆27Updated last year
- Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning wit…☆69Updated 3 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated 2 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆46Updated 6 years ago
- simplified searching, fetching, and parsing records from NCBI using their E-utilities interface☆63Updated last month
- Reproducible machine learning analysis of gene expression and alternative splicing data☆125Updated 2 years ago
- ☆18Updated 6 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- Efficient handling of FASTQ files from Python☆51Updated 2 months ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16Updated 11 years ago
- Vector space representation of genetic data☆36Updated 9 years ago
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆97Updated last year
- A framework for keeping biomedical text mining result up-to-date☆42Updated 5 years ago
- Pandas DataFrames for phylogenetics☆75Updated 4 years ago
- Biomedical wordlists (of drugs, genes, etc) for several text mining projects☆19Updated 2 years ago
- Literature mining for T cell relations☆23Updated 3 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- Integrated platform for unifying scientific workflow management and graph databases for transcriptome data analysis.☆10Updated 7 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 8 years ago
- OBO-formatted ontologies → networkx (Python 3)☆150Updated 10 months ago
- Python client for MyVariant.info web services.☆23Updated last year