Take command of your set enrichment analyses.
☆23Mar 1, 2026Updated this week
Alternatives and similar repositories for sparrow
Users that are interested in sparrow are comparing it to the libraries listed below
Sorting:
- Modular & interactive analysis components for bioinformatics☆18Dec 9, 2025Updated 2 months ago
- A hacky little interface to call the Enrichr functional enrichment tool from R.☆13Dec 13, 2018Updated 7 years ago
- Nascent Transcription Processing Pipeline☆22Nov 20, 2025Updated 3 months ago
- Container class to represent genomic locations and support genomic analysis☆26Updated this week
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 2 years ago
- edgePython is a Python implementation of the Bioconductor edgeR package for differential analysis of genomics count data. It also include…☆42Updated this week
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- Wrapper over rust-htslib for building collections of BAM records for testing.☆10Dec 1, 2025Updated 3 months ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆63Jun 3, 2025Updated 9 months ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 2 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 2 years ago
- Quality of life improvements for Bioinformatics in Python.☆31Feb 28, 2026Updated last week
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆14Nov 25, 2025Updated 3 months ago
- Lightweight Iterative Gene set Enrichment in R☆59Oct 3, 2024Updated last year
- A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)☆16Feb 9, 2026Updated 3 weeks ago
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Nov 10, 2025Updated 3 months ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago
- A program for the analysis of single cell nanopore long read data☆20Jul 1, 2025Updated 8 months ago
- PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT☆18Updated this week
- Template for building a bioconductor workshop package using github actions☆22Jun 26, 2025Updated 8 months ago
- A template for a dockerized R development environment for VScode☆21Jan 11, 2026Updated last month
- Read RDS files, in Python☆26Updated this week
- browse help files as Rmarkdown documents☆20Feb 1, 2024Updated 2 years ago
- Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation☆22Dec 18, 2025Updated 2 months ago
- Foundation of vector-like and list-like containers in Bioconductor☆17Oct 30, 2025Updated 4 months ago
- zero-inflated negative binomial gene expression in R☆20Jan 31, 2018Updated 8 years ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- Search your github stars in R☆25May 26, 2020Updated 5 years ago
- Test data for MultiQC.☆24Updated this week
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆26Jan 29, 2026Updated last month
- R/shiny interface for interactive visualization of data in SummarizedExperiment objects☆229Jan 14, 2026Updated last month
- Layout Manager Widget for R and Shiny☆31Dec 9, 2025Updated 2 months ago
- Toolbox package for organizing and working with TCGA data☆28Dec 11, 2025Updated 2 months ago
- Analyzing RNA-Seq with approximate likelihood☆26Dec 13, 2020Updated 5 years ago
- FELLA: an R package for Metabolomics data enrichment through diffusion☆23Jan 23, 2026Updated last month
- Extension of SpatialExperiment with sf☆57Feb 19, 2026Updated 2 weeks ago
- bioinformatics for peter☆11Apr 8, 2025Updated 10 months ago