Take command of your set enrichment analyses.
☆23Jun 26, 2026Updated last week
Alternatives and similar repositories for sparrow
Users that are interested in sparrow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modular & interactive analysis components for bioinformatics☆18Dec 9, 2025Updated 6 months ago
- A hacky little interface to call the Enrichr functional enrichment tool from R.☆13Dec 13, 2018Updated 7 years ago
- Nascent Transcription Processing Pipeline☆23Jun 25, 2026Updated last week
- Wrapper over rust-htslib for building collections of BAM records for testing.☆10Dec 1, 2025Updated 7 months ago
- Container class to represent genomic locations and support genomic analysis☆27Updated this week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 3 years ago
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- Lightweight Python interfaces for reading, writing, and querying genomic regions (BED)☆15May 18, 2026Updated last month
- A ggplot interface for creating clincial trial swimlanes☆16Aug 2, 2022Updated 3 years ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Lightweight Iterative Gene set Enrichment in R☆59Oct 3, 2024Updated last year
- Benchmarking pipeline for single-cell perturbation prediction tools☆34Jul 11, 2025Updated 11 months ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Quality of life improvements for Bioinformatics in Python.☆33May 21, 2026Updated last month
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Nov 10, 2025Updated 7 months ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated 2 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆11Mar 10, 2022Updated 4 years ago
- Snakemake workflow to benchmark scRNA-seq data simulators☆14Aug 10, 2022Updated 3 years ago
- A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)☆16Feb 9, 2026Updated 4 months ago
- Course materials for the IBioIC Introduction to Bioinformatics training course☆12Jun 4, 2017Updated 9 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆33Dec 1, 2025Updated 7 months ago
- A collection of R functions to aid in host-pathogen genomic research☆12May 8, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A template for a dockerized R development environment for VScode☆21Jan 11, 2026Updated 5 months ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Dec 1, 2025Updated 7 months ago
- R/shiny interface for interactive visualization of data in SummarizedExperiment objects☆230Jun 21, 2026Updated 2 weeks ago
- An R-Package to Visualize the (Causal) Effect of a Continuous Variable on a Time-To-Event Outcome☆16Jan 29, 2026Updated 5 months ago
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆32Jan 29, 2026Updated 5 months ago
- BioC2020: Where Software and Biology Connect☆12Mar 15, 2023Updated 3 years ago
- Scripts accompanying "Microanatomy of the human atherosclerotic plaque by single-cell transcriptomics"☆12Apr 20, 2022Updated 4 years ago
- Differential expression and allelic analysis, nonparametric statistics☆32Jan 3, 2025Updated last year
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A program for the analysis of single cell nanopore long read data☆22Jul 1, 2025Updated last year
- A performant scientific image visualization system.