This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
☆216Feb 23, 2026Updated last week
Alternatives and similar repositories for xcms
Users that are interested in xcms are comparing it to the libraries listed below
Sorting:
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- Base Classes and Functions for Mass Spectrometry and Proteomics☆136Aug 26, 2025Updated 6 months ago
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆46Dec 15, 2025Updated 2 months ago
- This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data☆14May 9, 2025Updated 9 months ago
- R package for MetFrag☆24Sep 25, 2017Updated 8 years ago
- On-instrument and post-acquisition targeted feature extraction☆13Sep 27, 2025Updated 5 months ago
- mzmine source code repository☆259Updated this week
- R package for MetaboAnalyst☆378Feb 18, 2026Updated last week
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- Tool for reliability assessment of omics peprocessing☆11Jan 13, 2026Updated last month
- Low level infrastructure to handle MS spectra☆43Feb 6, 2026Updated 3 weeks ago
- The codebase of the OpenMS project☆566Updated this week
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- A collection of common mz values found in mass spectrometry.☆20Jun 13, 2024Updated last year
- Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.☆249Feb 11, 2026Updated 2 weeks ago
- Thermo RAW file parser that runs on Linux/Mac and all other platforms that support Mono☆237Updated this week
- MZmine 2 source code repository☆138May 5, 2024Updated last year
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- Organic/biological mass spectrometry data analysis (development version).☆32Jan 27, 2026Updated last month
- LC-MS data processing tool for large-scale metabolomics experiments.☆91Jul 11, 2022Updated 3 years ago
- SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…☆140Nov 7, 2025Updated 3 months ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆45Apr 1, 2025Updated 11 months ago
- R package for optimized LC-MS spectra processing☆27Updated this week
- The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis …☆298Updated this week
- Interactive software to analyze and browse mass spectrometry data☆21Jul 3, 2025Updated 8 months ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28May 25, 2023Updated 2 years ago
- Convert MSP files into a database☆10May 4, 2021Updated 4 years ago
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆13Feb 24, 2026Updated last week
- Metabolomics Tools for Galaxy☆21Nov 22, 2016Updated 9 years ago
- ☆121Apr 8, 2023Updated 2 years ago
- GC/LC-MS data analysis for environmental science☆17May 20, 2025Updated 9 months ago
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆34Aug 19, 2021Updated 4 years ago
- An R package for non-targeted LC-MS metabolomics☆20Oct 31, 2025Updated 4 months ago
- asari, metabolomics data preprocessing☆59Jan 29, 2026Updated last month
- ☆13Nov 16, 2021Updated 4 years ago
- Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, …☆15Nov 13, 2018Updated 7 years ago
- All the source code of MetDNA.☆20Mar 1, 2022Updated 4 years ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- Galaxy tools for metabolomics maintained by Workflow4Metabolomics☆32Jan 20, 2026Updated last month