Alternatives and similar repositories for mtVAE

Users that are interested in mtVAE are comparing it to the libraries listed below

• InfectionMedicineProteomics / BINN
  Generating biologically informed neural networks
  ☆48Updated 7 months ago
• horvatovichlab / MSIWarp
  MAss spectra alignment tool for MSI data
  ☆19Updated 3 years ago
• BorgwardtLab / maldi_amr
  Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"
  ☆44Updated 2 years ago
• ZhuMetLab / MetImage
  Converting LC−MS-based Untargeted Metabolomics Data into Image towards Clinical Diagnosis
  ☆12Updated 2 years ago
• nec-research / vibtcr
  Code for "Attentive Variational Information Bottleneck for TCR-peptide Interaction Prediction", Grazioli et al., Bioinformatics 2022
  ☆23Updated 2 years ago
• JakobSteinfeldt / MetabolomicsCommonDiseases
  Downstream analysis for the paper "Metabolomic profiles predict individual multi-disease outcomes in the UK Biobank cohort".
  ☆13Updated last year
• cwieder / PathIntegrate
  PathIntegrate Python package for pathway-based multi-omics data integration
  ☆16Updated 10 months ago
• ML4GLand / SeqPro
  Genomic sequence preprocessing toolkit
  ☆12Updated last month
• kusterlab / curve_curator
  Analysis platform for large-scale dose-dependent data
  ☆25Updated 3 weeks ago
• saezlab / ShinyFUNKI
  FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…
  ☆14Updated 3 years ago
• bioinformatics-core-shared-training / UnivCambridge_ScRnaSeqIntro_Base
  ☆10Updated 2 months ago
• huangzhii / biolearns
  BioLearns: Computational Biology and Bioinformatics Toolbox in Python
  ☆12Updated 2 years ago
• shuzhao-li-lab / espol-workshop
  5-day workshop on Metabolomics and Data Analysis
  ☆16Updated 6 years ago
• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆16Updated this week
• cwieder / py-ssPA
  Single sample pathway analysis tools for omics data
  ☆13Updated 10 months ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• MannLabs / OmicLearn
  🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data
  ☆36Updated last year
• thbuerg / MetabolomicsCommonDiseases
  ⛑ Code for "Metabolomic profiles predict individual multi-disease outcomes" ⛑
  ☆22Updated 2 years ago
• LamineTourelab / Tutorial
  Tutorials on machine learning, artificial intelligence in general and in biomedical research.
  ☆16Updated last year
• WandeRum / MVI-evaluation
  Missing value imputation and evaluation, especially for metabolomics data sets
  ☆18Updated 7 years ago
• zj-zhang / AMBER
  Automated Modelling for Biological Evidence-based Research
  ☆46Updated last year
• cantinilab / momix-notebook
  ☆67Updated last year
• AstraZeneca / Omicsfold
  Multi-omics data normalisation, model fitting and visualisation.
  ☆27Updated 2 years ago
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆10Updated 4 months ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆27Updated 5 months ago
• MaayanLab / blitzgsea
  Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …
  ☆52Updated 4 months ago
• RasmussenLab / MOVE
  MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
  ☆84Updated 10 months ago
• biswapriyamisra / metabolomics
  Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016
  ☆12Updated 5 years ago
• sanderlab / CellBox
  CellBox: Interpretable Machine Learning for Perturbation Biology
  ☆56Updated 2 years ago
• glasgowcompbio / pyMultiOmics
  Python toolbox for multi-omics data mapping and analysis
  ☆25Updated 2 years ago