krumsieklab / mtVAELinks
Variational autoencoders learn universal latent representations of metabolomics data (supplementary code)
☆13Updated 3 years ago
Alternatives and similar repositories for mtVAE
Users that are interested in mtVAE are comparing it to the libraries listed below
Sorting:
- Generating biologically informed neural networks☆57Updated 11 months ago
- Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"☆46Updated 3 years ago
- Converting LC−MS-based Untargeted Metabolomics Data into Image towards Clinical Diagnosis☆12Updated 2 years ago
- ☆13Updated 2 months ago
- BioLearns: Computational Biology and Bioinformatics Toolbox in Python☆12Updated 3 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆18Updated last year
- Genomic sequence preprocessing toolkit☆13Updated 2 weeks ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆17Updated last week
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Updated 4 years ago
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆39Updated last year
- Analysis platform for large-scale dose-dependent data☆26Updated 2 months ago
- Biological Network Integration using Convolutions☆63Updated 2 years ago
- R for Mass Spectrometry documentation☆14Updated 2 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆59Updated 8 months ago
- MetNormalizer is used to normalize large scale metabolomics data.☆22Updated 4 years ago
- Mass spectrometry imaging toolbox☆68Updated 2 months ago
- CMap Notebooks for LINCS 2020 Workshop☆49Updated 4 years ago
- Python toolbox for multi-omics data mapping and analysis☆27Updated 2 years ago
- MAss spectra alignment tool for MSI data☆19Updated 3 years ago
- Sequence-based prediction of peptide-TCR interactions using paired chain data☆13Updated last week
- Python package to load and query ARCHS4 data☆25Updated 6 months ago
- The complete FlowSOM package known from R, now available in Python!☆27Updated last week
- 5-day workshop on Metabolomics and Data Analysis☆18Updated 6 years ago
- Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..☆45Updated 3 months ago
- Single Cell Consensus Clustering with Speed☆20Updated 3 years ago
- ☆34Updated 7 years ago
- a user-friendly and modular design R package tailored for analyzing single-cell and spatial transcriptome sequencing data of hematopoieti…☆18Updated 9 months ago
- ⛑ Code for "Metabolomic profiles predict individual multi-disease outcomes" ⛑☆22Updated 3 years ago
- ☆20Updated 5 years ago
- ☆28Updated 9 months ago