Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"
☆48Oct 7, 2022Updated 3 years ago
Alternatives and similar repositories for maldi_amr
Users that are interested in maldi_amr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software library for Maldi-Tof preprocessing and machine learning analysis.☆40May 9, 2023Updated 3 years ago
- A small library to provide peak picking for software processing mass spectrometry data☆24Apr 17, 2026Updated 3 months ago
- ALD study data analysis☆13Feb 16, 2023Updated 3 years ago
- rapid serotyping of Vibrio parahaemolyticus from whole genome sequencing data using serogroup-specific genes☆10Sep 2, 2021Updated 4 years ago
- R for Mass Spectrometry documentation☆15Jun 26, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Config files for my GitHub profile.☆14Aug 19, 2024Updated last year
- Official repository for the ICLR 2022 paper "Evaluation Metrics for Graph Generative Models: Problems, Pitfalls, and Practical Solutions"…☆14Jul 5, 2022Updated 4 years ago
- MaxQuant and Perseus Bug Reporting☆10Mar 19, 2025Updated last year
- 🧬 💻 TOSTADAS → Toolkit for Open Sequence Triage, Annotation and DAtabase Submission☆29Mar 10, 2026Updated 5 months ago
- Print barcodes in R☆10Oct 27, 2020Updated 5 years ago
- ☆20Jan 6, 2023Updated 3 years ago
- CoreMS is a comprehensive mass spectrometry software framework☆69Updated this week
- Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial propertie…☆112Jul 9, 2026Updated last month
- Python package to handle and analyze GC-IMS data.☆22Jun 30, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Documenting code to recreate art☆18Jun 11, 2023Updated 3 years ago
- Scanomatic☆11Oct 12, 2023Updated 2 years ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Oct 29, 2021Updated 4 years ago
- hazard and excess hazard modelling with multidimensional penalized splines☆12Mar 25, 2026Updated 4 months ago
- An R package for working with the Ecological Database of the World's Insect Pathogens (EDWIP)☆14Jan 15, 2025Updated last year
- File format for 96-well plate layouts.☆26Nov 1, 2023Updated 2 years ago
- Automated pipeline for whole bacterial genome analysis based on snakemake☆12May 16, 2022Updated 4 years ago
- Mixed Effect Machine Learning☆10Apr 16, 2020Updated 6 years ago
- DEPRECATED - Use https://docs.pupil-labs.com/invisible/how-tos/data-collection-with-the-companion-app/monitor-your-data-collection-in-rea…☆10Jul 7, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 10 months ago
- pyRforest: A comprehensive R package for genomic data analysis featuring scikit-learn Random Forests in R☆13Aug 20, 2024Updated last year
- machine learning guided antigenic evolution prediction☆12Jun 19, 2023Updated 3 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 5 years ago
- Protocol for finding informative protein families and then using them to score omic samples☆19Jul 27, 2022Updated 4 years ago
- ☆12May 29, 2019Updated 7 years ago
- TEINet: a deep learning framework for prediction of TCR-epitope binding specificity☆16Jun 30, 2023Updated 3 years ago
- ☆10Jun 29, 2021Updated 5 years ago
- ☆14Jul 7, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- Generate Dose-Response Curves in Python☆13May 26, 2026Updated 2 months ago
- CNN models for antibiotic resistance prediction in M. tuberculosis genomes. From Green & Yoon et al (forthcoming)☆28Jan 19, 2023Updated 3 years ago
- materials from data science dojo☆16Aug 15, 2017Updated 9 years ago
- A data science portfolio of Ken Jee.☆17May 16, 2020Updated 6 years ago
- Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series☆14Oct 17, 2025Updated 9 months ago
- ☆18Aug 5, 2023Updated 3 years ago