kingaa / ouchLinks
Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses
☆16Updated 8 months ago
Alternatives and similar repositories for ouch
Users that are interested in ouch are comparing it to the libraries listed below
Sorting:
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 4 years ago
- ☆28Updated 3 years ago
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆16Updated 4 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆14Updated 9 years ago
- ☆16Updated 6 years ago
- ANNOgesic - A Swiss army knife for the RNA-Seq based annotation of bacterial/archaeal genomes☆33Updated last year
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 4 months ago
- cgat-apps repository☆34Updated 9 months ago
- Hitting associations with k-mers☆44Updated 3 years ago
- Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.☆22Updated 7 years ago
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆22Updated 2 months ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- A JBrowse 1 plugin to view multiple alignment format (MAF) files☆27Updated 2 years ago
- Haplotype and population structure inference using neural networks.☆28Updated last year
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆27Updated last year
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Updated last month
- Nanopore Real-Time Analysis Tool☆17Updated last year
- convert a blast output to a bed file☆12Updated 10 years ago
- tspex: tissue-specificity calculator☆36Updated 2 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆26Updated 2 months ago
- Evolutionary Transcriptomics with R☆47Updated this week
- Computational Analysis of Gene Expression Evolution☆45Updated 5 months ago
- Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for a…☆51Updated 8 years ago
- Long RNA-seq analysis workflow☆21Updated 3 months ago
- Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.☆17Updated 6 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 4 years ago
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…☆33Updated 5 years ago
- ☆44Updated last year
- k-mer similarity analysis pipeline☆22Updated 2 months ago
- Convert a Genbank flat file to an NCBI ptt file☆17Updated 2 years ago