Code for BEHRT: Transformer for Electronic Health Records
☆129Apr 6, 2023Updated 3 years ago
Alternatives and similar repositories for BEHRT
Users that are interested in BEHRT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records☆19Mar 8, 2023Updated 3 years ago
- python code for BRLTM model☆14Jan 17, 2021Updated 5 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆331Feb 19, 2024Updated 2 years ago
- source codes based on PyTorch to analyze EHR☆150Jan 22, 2024Updated 2 years ago
- A toolkit for developing foundation models using Electronic Health Record (EHR) data.☆61Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks☆49Dec 9, 2025Updated 8 months ago
- Code for doing machine learning with various EHRs☆22Mar 1, 2023Updated 3 years ago
- ☆39Feb 14, 2020Updated 6 years ago
- A customizable pipeline for multimodal data extraction from MIMIC-IV!☆351Jul 6, 2026Updated last month
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆231Jun 6, 2025Updated last year
- Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139☆24Jul 12, 2022Updated 4 years ago
- Code for "DuETT: Dual Event Time Transformer for Electronic Health Records"☆22Aug 31, 2023Updated 2 years ago
- ☆16Aug 28, 2020Updated 5 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆447Oct 17, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆41Feb 17, 2022Updated 4 years ago
- ☆22Jul 20, 2022Updated 4 years ago
- Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction☆32Jul 26, 2019Updated 7 years ago
- The repository for the paper "Predicting in-hospital mortality by combining clinical notes with time-series data"☆12May 23, 2021Updated 5 years ago
- A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction☆37Jul 26, 2022Updated 4 years ago
- A data analysis package for high-dimensional, multi-block data.☆12Jan 13, 2022Updated 4 years ago
- ☆21Dec 14, 2021Updated 4 years ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆47Jun 4, 2026Updated 2 months ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆430Oct 7, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- code for ehrMGAN☆25Feb 21, 2023Updated 3 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆100Mar 19, 2026Updated 4 months ago
- ☆110Aug 18, 2021Updated 4 years ago
- Repository for the HiRID ICU Benchmark (HiB) project☆62Jul 13, 2023Updated 3 years ago
- ☆19May 5, 2026Updated 3 months ago
- ☆51Oct 25, 2023Updated 2 years ago
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆42Aug 4, 2026Updated last week
- A Deep Dynamic Memory Model for Predictive Medicine☆69May 21, 2018Updated 8 years ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆181Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆11Jul 31, 2020Updated 6 years ago
- ☆34Jan 28, 2025Updated last year
- Predicting ICD Codes from Clinical Notes☆65Sep 11, 2020Updated 5 years ago
- A tool for generating clinical notes using Synthea patient FHIR Bundles☆16Jun 24, 2025Updated last year
- Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits☆11Jun 2, 2021Updated 5 years ago
- ☆27Dec 31, 2019Updated 6 years ago
- ☆11Aug 2, 2019Updated 7 years ago