luoyuanlab / Clinical-Longformer

Related projects ⓘ

Alternatives and complementary repositories for Clinical-Longformer

• simonlevine / clinical-longformer
  ☆38Updated 2 years ago
• asappresearch / clip
  ☆27Updated 3 years ago
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆70Updated 3 weeks ago
• allenai / BEEP
  Code repository for BEEP (Biomedical Evidence Enhanced Predictions) clinical outcome prediction system
  ☆24Updated last year
• stefanhgm / patient_summaries_with_llms
  Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"
  ☆10Updated 3 months ago
• salrowili / BioM-Transformers
  BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA
  ☆34Updated 9 months ago
• whaleloops / KEPT
  auto icd coding with prompt
  ☆47Updated 6 months ago
• gmichalo / UmlsBERT
  ☆95Updated 2 years ago
• bvanaken / clinical-outcome-prediction
  Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration
  ☆87Updated 3 months ago
• wboag / mimic-tokenize
  My heuristic script for sentence tokenization of mimic notes
  ☆8Updated 7 years ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆39Updated 10 months ago
• 3mcloud / MDACE
  The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…
  ☆24Updated last year
• facebookresearch / bio-lm
  We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.
  ☆157Updated 3 years ago
• uf-hobi-informatics-lab / NLPreprocessing
  A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization
  ☆29Updated 6 months ago
• nlpie-research / Compact-Biomedical-Transformers
  This repository contains the code used for distillation and fine-tuning of compact biomedical transformers that have been introduced in t…
  ☆16Updated 7 months ago
• acadTags / Explainable-Automated-Medical-Coding
  Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
  ☆58Updated 2 years ago
• NtaylorOX / Public_Clinical_Prompt
  ☆48Updated 2 years ago
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆75Updated 2 years ago
• thomasnguyen92 / MIMIC-IV-ICD-data-processing
  ☆28Updated last year
• abachaa / MEDIQA-Chat-2023
  MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023
  ☆48Updated last year
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆86Updated 5 months ago
• beamandrew / cui2vec
  ☆51Updated 4 years ago
• MiuLab / PLM-ICD
  PLM-ICD: Automatic ICD Coding with Pretrained Language Models
  ☆56Updated last year
• qingyu-qc / gpt_bionlp_benchmark
  ☆25Updated 10 months ago
• elehman16 / exposing_patient_data_release
  ☆49Updated 3 years ago
• uf-hobi-informatics-lab / ClinicalTransformerNER
  a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms
  ☆144Updated last year
• dmis-lab / BioLAMA
  EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?
  ☆54Updated last year
• glee4810 / EHRSQL
  [NeurIPS'22] EHRSQL: A Practical Text-to-SQL Benchmark for Electronic Health Records
  ☆74Updated 4 months ago
• MIT-LCP / bloatectomy
  A python package for removing duplicate text in clinical notes or other documents
  ☆34Updated 4 years ago
• lindvalllab / clinicalXLNet
  Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation
  ☆46Updated 3 years ago