Alternatives and similar repositories for embeddings:

Users that are interested in embeddings are comparing it to the libraries listed below

• mp2893 / med2vec
  Repository for Med2Vec project
  ☆218Updated 6 years ago
• text-machine-lab / CliNER
  Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in cl…
  ☆234Updated 4 years ago
• AnthonyMRios / pymetamap
  Python wraper for MetaMap
  ☆170Updated 4 years ago
• sirrice / icd9
  Python library for hierarchy of ICD9 Codes
  ☆104Updated 6 years ago
• mp2893 / doctorai
  Repository for Doctor AI project
  ☆276Updated 11 months ago
• jamesmullenbach / caml-mimic
  multilabel classification of EHR notes
  ☆285Updated 4 years ago
• lsy3 / clinical-notes-diagnosis-dl-nlp
  ☆69Updated 3 years ago
• mp2893 / mime
  MiME Repository
  ☆105Updated 5 years ago
• trangptm / DeepCare
  A Deep Dynamic Memory Model for Predictive Medicine
  ☆70Updated 6 years ago
• EpistasisLab / ClinicalDataSources
  Open or Easy Access Clinical Data Sources for Biomedical Research
  ☆171Updated 8 years ago
• mp2893 / retain
  RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanism
  ☆213Updated 7 years ago
• chb / py-umls
  Basic Python 3 tools to interact with UMLS lexica
  ☆124Updated 6 years ago
• mp2893 / gram
  Graph-based Attention Model
  ☆241Updated last year
• clinicalml / HealthKnowledgeGraph
  Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data
  ☆100Updated 4 years ago
• chapmanbe / pyConTextNLP
  ☆98Updated last year
• YaronBlinder / MIMIC-III_readmission
  Predicting 30-day ICU readmissions from the MIMIC-III database
  ☆84Updated 7 years ago
• mp2893 / rnn_predict
  Simple RNN (Gated Recurrent Units) for predicting a diagnosis
  ☆67Updated 8 years ago
• Georgetown-IR-Lab / QuickUMLS
  System for Medical Concept Extraction and Linking
  ☆395Updated 7 months ago
• Google-Health / records-research
  ☆222Updated 3 years ago
• Optum / retain-keras
  Reimplementation of RETAIN Recurrent Neural Network in Keras
  ☆83Updated last year
• clinicalml / deepDiagnosis
  A torch package for learning diagnosis models from temporal patient data.
  ☆113Updated 7 years ago
• MLforHealth / MIMIC_Extract
  MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III
  ☆435Updated 7 months ago
• MIT-LCP / mimic-omop
  Mapping the MIMIC-III database to the OMOP schema
  ☆132Updated 11 months ago
• kexinhuang12345 / clinicalBERT
  ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
  ☆407Updated 2 years ago
• cambridgeltl / BioNLP-2016
  ☆121Updated 6 years ago
• alistairewj / sepsis3-mimic
  Evaluation of the Sepsis-3 guidelines in MIMIC-III
  ☆192Updated 2 years ago
• sebastianGehrmann / phenotyping
  This repository contains data and code for the paper"Comparing deep learning and concept extraction based methods for patient phenotyping…
  ☆21Updated 6 years ago
• deepak-kaji / mimic-lstm
  This is a complete preprocessing, model training, and figure generation repo for "An attention based deep learning model of clinical even…
  ☆77Updated 10 months ago
• NYUMedML / DeepEHR
  Chronic Disease Prediction Using Medical Notes
  ☆268Updated 5 years ago
• EpistasisLab / MIMIC_trajectories
  ☆30Updated 7 years ago