YerevaNN / mimic3-benchmarks
Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.
☆834Updated 2 years ago
Alternatives and similar repositories for mimic3-benchmarks
Users that are interested in mimic3-benchmarks are comparing it to the libraries listed below
Sorting:
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III☆442Updated 10 months ago
- Evaluation of the Sepsis-3 guidelines in MIMIC-III☆195Updated 2 years ago
- A customizable pipeline for data extraction from MIMIC-IV.☆224Updated last year
- Code and website related to the eICU Collaborative Research Database☆343Updated 4 months ago
- ☆127Updated 7 months ago
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code☆282Updated 3 years ago
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases☆2,843Updated 3 weeks ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.☆425Updated 2 years ago
- ☆222Updated 3 years ago
- This is a complete preprocessing, model training, and figure generation repo for "An attention based deep learning model of clinical even…☆76Updated last year
- RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanism☆213Updated 7 years ago
- Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"☆247Updated 4 years ago
- AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916☆176Updated 4 months ago
- Sepsis cohort from MIMIC dataset☆113Updated last year
- source codes based on PyTorch to analyze EHR☆136Updated last year
- Sepsis Prediction on MIMIC☆71Updated 3 years ago
- Predicting 30-day ICU readmissions from the MIMIC-III database☆86Updated 7 years ago
- Introduction to MIMIC-III, the Critical Care Database☆86Updated 7 years ago
- Repository for the paper describing MIMIC-III☆80Updated 8 years ago
- Real time mortality prediction in the MIMIC-III database☆53Updated 7 years ago
- repository for Publicly Available Clinical BERT Embeddings☆714Updated 4 years ago
- Reinforcement Learning for optimal sepsis treatment policies☆102Updated 7 years ago
- Website for the MIMIC Critical Care Database (currently version MIMIC-III)☆116Updated 10 months ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆84Updated 2 years ago
- Code for BEHRT: Transformer for Electronic Health Records☆109Updated 2 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆415Updated 2 years ago
- Mapping the MIMIC-III database to the OMOP schema☆134Updated last year
- A Deep Learning Python Toolkit for Healthcare Applications.☆1,151Updated last week
- Repository for Med2Vec project☆218Updated 7 years ago
- Med-BERT, contextualized embedding model for structured EHR data☆283Updated last year