YerevaNN / mimic3-benchmarks
Python suite to construct benchmark machine learning datasets from the MIMIC-III π clinical database.
β826Updated last year
Alternatives and similar repositories for mimic3-benchmarks:
Users that are interested in mimic3-benchmarks are comparing it to the libraries listed below
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-IIIβ436Updated 8 months ago
- Evaluation of the Sepsis-3 guidelines in MIMIC-IIIβ192Updated 2 years ago
- β127Updated 5 months ago
- Code and website related to the eICU Collaborative Research Databaseβ335Updated 3 months ago
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-codeβ277Updated 3 years ago
- Curated list of awesome papers for electronic health records(EHR) mining, machine learning, and deep learning.β424Updated 2 years ago
- A customizable pipeline for data extraction from MIMIC-IV.β209Updated last year
- RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanismβ213Updated 7 years ago
- β222Updated 3 years ago
- This is a complete preprocessing, model training, and figure generation repo for "An attention based deep learning model of clinical evenβ¦β77Updated 10 months ago
- MIMIC Code Repository: Code shared by the research community for the MIMIC family of databasesβ2,759Updated 6 months ago
- AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916β170Updated 2 months ago
- source codes based on PyTorch to analyze EHRβ134Updated last year
- Predicting 30-day ICU readmissions from the MIMIC-III databaseβ84Updated 7 years ago
- Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"β247Updated 4 years ago
- Sepsis Prediction on MIMICβ69Updated 3 years ago
- Repository for the paper describing MIMIC-IIIβ77Updated 8 years ago
- multilabel classification of EHR notesβ285Updated 4 years ago
- Repository for Med2Vec projectβ218Updated 6 years ago
- Sepsis cohort from MIMIC datasetβ106Updated last year
- Real time mortality prediction in the MIMIC-III databaseβ53Updated 6 years ago
- Graph-based Attention Modelβ241Updated last year
- Website for the MIMIC Critical Care Database (currently version MIMIC-III)β112Updated 8 months ago
- MiME Repositoryβ105Updated 5 years ago
- Reinforcement Learning for optimal sepsis treatment policiesβ102Updated 7 years ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.β77Updated 2 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)β407Updated 2 years ago
- FlexIble Data-Driven pipeLinE β a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algoβ¦β92Updated 9 months ago
- Introduction to MIMIC-III, the Critical Care Databaseβ86Updated 7 years ago
- Repository for Doctor AI projectβ276Updated last year