public code repository for paper "Health system scale language models are general purpose clinical prediction engines"
☆125Jul 28, 2023Updated 2 years ago
Alternatives and similar repositories for NYUTron
Users that are interested in NYUTron are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆38Mar 27, 2022Updated 4 years ago
- [ NeurIPS 2023 ] Official Codebase for "Aligning Synthetic Medical Images with Clinical Knowledge using Human Feedback"☆20Oct 19, 2023Updated 2 years ago
- ☆49May 14, 2022Updated 4 years ago
- Revised functions of the R packages crimCV and traj☆20Apr 22, 2021Updated 5 years ago
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆17Jul 20, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆126Jun 12, 2026Updated 3 weeks ago
- Python package for InfoAlign☆13Oct 14, 2024Updated last year
- Evaluating LLMs for medical applications☆15Nov 30, 2023Updated 2 years ago
- ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)☆442Oct 17, 2022Updated 3 years ago
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆102May 17, 2025Updated last year
- ☆110Aug 18, 2021Updated 4 years ago
- Dataset for medical question summarization introduced in the ACL 2019 paper "On the Summarization of Consumer Health Questions" (A. Ben A…☆33May 13, 2026Updated last month
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆73Apr 10, 2026Updated 2 months ago
- ☆15Apr 30, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Expert annotated Hallmarks of Cancer Corpus☆21Sep 18, 2018Updated 7 years ago
- ☆64Jul 4, 2023Updated 3 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆225Jun 6, 2025Updated last year
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆17Sep 28, 2020Updated 5 years ago
- ☆12Jun 26, 2024Updated 2 years ago
- EMNLP'22 | PromptEHR: Conditional Electronic Healthcare Records Generation with Prompt Learning☆31Jun 8, 2023Updated 3 years ago
- A Serverless Text Annotation Tool for Corpus Development☆60Feb 19, 2025Updated last year
- This repository is part of a blog post that guides users through creating a NLU search application using Amazon SageMaker and Amazon Elas…☆17Jul 19, 2023Updated 2 years ago
- BioELECTRA☆51Oct 27, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An R package to calculate time-dependent person cost and health functions e.g. quality-adjusted life-years with discounting.☆11Jul 20, 2021Updated 4 years ago
- MRtrix scripts to generate dense weighted structural connectomes from the Human Connectome Project "minimally pre-processed" diffusion MR…☆22Dec 23, 2022Updated 3 years ago
- [NeurIPS 2024 Datasets and Benchmark Track Oral] MedCalc-Bench: Evaluating Large Language Models for Medical Calculations☆92Dec 18, 2025Updated 6 months ago
- repository for Publicly Available Clinical BERT Embeddings☆769Aug 25, 2020Updated 5 years ago
- A Python Natural Language Processing Toolkit for Electronic Health Record Texts☆13May 24, 2023Updated 3 years ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆76Jun 17, 2025Updated last year
- ☆55Jun 23, 2024Updated 2 years ago
- PyChem-Pro: a molecular viewer in 2D and 3D, molecular docking pose generator, cheminformatics library, molecular descriptor calculator, …☆194Updated this week
- A version of MIMIC-IV in FHIR☆55Oct 28, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code for the paper "Automated Generation of Hospital Discharge Summaries Using Clinical Guidelines and Large Language Models"☆12May 3, 2024Updated 2 years ago
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆96Oct 28, 2022Updated 3 years ago
- Temporal-Comorbidity Adjusted Risk of Emergency Readmission☆10Dec 23, 2017Updated 8 years ago
- ☆345Nov 2, 2023Updated 2 years ago
- [in development]☆41Jun 25, 2021Updated 5 years ago
- ☆16Jan 31, 2022Updated 4 years ago
- Medical reasoning using large language models☆94Jan 9, 2024Updated 2 years ago