kaloeffler / EmbedTrackLinks
☆21Updated 2 years ago
Alternatives and similar repositories for EmbedTrack
Users that are interested in EmbedTrack are comparing it to the libraries listed below
Sorting:
- [ECCV 2022] Official PyTorch implementation of the paper - Graph Neural Network for Cell Tracking in Microscopy Videos☆70Updated 2 years ago
- (NeurIPS 2022 CellSeg Challenge - 1st Winner) Open source code for "MEDIAR: Harmony of Data-Centric and Model-Centric for Multi-Modality …☆153Updated last year
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆116Updated last year
- Unsupervised Instance Segmentation in Microscopy☆23Updated last year
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆22Updated 2 years ago
- Scalable Instance Segmentation using PyTorch & PyTorch Lightning.☆140Updated 2 months ago
- PyTorch implementation of SPOCO☆32Updated 11 months ago
- Codebase for "A Foundation Model for Cell Segmentation"☆98Updated this week
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆115Updated last week
- Segment Anything Model (SAM) native Qt UI☆203Updated 10 months ago
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆24Updated 2 years ago
- ☆236Updated last year
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆97Updated 3 weeks ago
- ☆173Updated last week
- A python algorithm for tracking cells in 3D time lapse images.☆60Updated 3 months ago
- Transformer-based cell tracking for live-cell microscopy☆75Updated last month
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Updated 11 months ago
- Segment Anything for Histopathology☆34Updated last month
- Segment Anything for Microscopy☆558Updated 3 weeks ago
- Cloud-based data annotation tools for biological images☆81Updated last year
- official implementation of the PatchPerPix instance segmentation method☆33Updated 2 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 months ago
- Python package for deep learning based image to image transformation☆53Updated 2 weeks ago
- ☆18Updated 2 years ago
- A tool for cell instance aware segmentation in densely packed 3D volumetric images☆114Updated this week
- Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for …☆33Updated 3 weeks ago
- ☆13Updated 3 years ago
- Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development☆31Updated 2 years ago
- Microsopic Image Analyzer (MIA)☆29Updated last year
- ☆194Updated 2 years ago