PapenfussLab / bionixLinks
Functional highly reproducible bioinformatics pipelines
☆90Updated 4 months ago
Alternatives and similar repositories for bionix
Users that are interested in bionix are comparing it to the libraries listed below
Sorting:
- Bioinformatics pipelines with Haskell and Shake☆56Updated 5 years ago
- A collection of bioinformatics algorithms☆12Updated 2 years ago
- RNAlien - unsupervised RNA family model construction☆14Updated 4 years ago
- Bayesian co-estimation of phylogenies and multiple alignments via MCMC☆47Updated 2 weeks ago
- NGLess: NGS with less work☆149Updated 4 months ago
- Standard set of packages and overlays for data-scientists [maintainer=@tbenst]☆79Updated 4 years ago
- GNU-Make-like utility for managing builds and complex workflows☆107Updated last year
- Estimate node ages of a phylogeny by approximating the phylogenetic likelihood with a multivariate normal distribution.☆10Updated 3 weeks ago
- high performance computing related nix resources☆87Updated 2 months ago
- All-in-one analysis pipeline☆35Updated 10 months ago
- ☆64Updated last year
- Tools for removing the tedious nature of creating nixpkgs derivations [maintainer=@costrouc]☆48Updated 4 months ago
- High-reproducibility CWL runner powered by Guix☆13Updated 3 weeks ago
- Nix Flake templates for various languages☆49Updated 9 months ago
- guix packages for bioinformatics software☆23Updated last year
- Extensive collection of Python projects from PyPI, for Nix!☆125Updated 2 years ago
- A Nix build graph profiler☆32Updated this week
- GeneNetwork (2nd generation)☆35Updated last week
- Bioinformatics plugin for nushell.☆30Updated last year
- A GPU-friendly implementation of SpliceAI☆11Updated 2 years ago
- Nextflow pipeline for hyperparameter optimization of machine learning models☆24Updated last year
- Temporal Pathway Synthesizer☆17Updated last year
- Uses the Nix package manager to visualize the dependencies of a given package☆195Updated last year
- https://hercules-ci.com build and deployment agent☆110Updated last week
- Static site generator in Nix expression language.☆222Updated 2 years ago
- Write container images as NixOS machines☆62Updated 3 years ago
- Autopatching binary packages to make them work with Nix☆48Updated 3 years ago
- Much better than a .dotfiles repo☆69Updated last month
- Fine-grained Haskell builds with Nix's dynamic derivations☆40Updated last month
- Easy website generation with hakyll + nix flakes☆17Updated 11 months ago