ved-sharma / HyperStackRegLinks
An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)
☆13Updated 3 years ago
Alternatives and similar repositories for HyperStackReg
Users that are interested in HyperStackReg are comparing it to the libraries listed below
Sorting:
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 7 months ago
- ☆13Updated 10 months ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆34Updated last week
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- BIRDS plug-in on Fiji and attached jar package☆21Updated 4 years ago
- Modified version of MultiStackRegistration, for use from scripts.☆13Updated 3 years ago
- ☆51Updated 7 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆39Updated last week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 7 months ago
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated 2 weeks ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Updated last year
- MultiModal Big Image Data Sharing and Exploration☆18Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 4 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Updated 8 months ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 3 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- GPU-accelerated image processing for everyone☆54Updated last year
- ☆12Updated 3 months ago
- ☆36Updated last year
- StarDist plugin for ImageJ☆30Updated 3 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated last month
- ☆23Updated 4 years ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated 2 weeks ago
- A napari plugin for clustering objects according to their properties.☆87Updated last week