ved-sharma / HyperStackRegLinks
An ImageJ/FIJI plugin for multi-channel Hyperstack alignment (registration)
☆13Updated 3 years ago
Alternatives and similar repositories for HyperStackReg
Users that are interested in HyperStackReg are comparing it to the libraries listed below
Sorting:
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 9 months ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆35Updated last month
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- ☆15Updated last year
- Modified version of MultiStackRegistration, for use from scripts.☆12Updated 3 years ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Updated last year
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆19Updated 2 months ago
- ☆20Updated 3 weeks ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Updated last month
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- BIRDS plug-in on Fiji and attached jar package☆21Updated 4 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated 2 months ago
- ☆51Updated 9 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last week
- GPU-accelerated image processing for everyone☆55Updated last year
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated 3 months ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated last year
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Updated 9 months ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Updated last month
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆102Updated last week
- A collection of demonstration materials for MorphoLibJ.☆12Updated 3 years ago
- Python scripts library for Aivia. Ask your questions on the forum >>☆14Updated last week
- MultiModal Big Image Data Sharing and Exploration☆18Updated 3 years ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆162Updated last week
- StarDist plugin for ImageJ☆30Updated 3 years ago
- ☆12Updated 5 months ago