A curated list of scientific image analysis resources and software tools.
☆42Apr 4, 2026Updated last month
Alternatives and similar repositories for awesome-scientific-image-analysis
Users that are interested in awesome-scientific-image-analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Graph-based framework to manipulate and analyze cell lineages from cell tracking data☆24May 18, 2026Updated last week
- An introduction to OME-Zarr for big bioimaging data☆26May 14, 2026Updated 2 weeks ago
- ☆12Jun 29, 2021Updated 4 years ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated 2 weeks ago
- An open-source Python library for the analysis of luminescence lifetime and hyperspectral images using the phasor approach.☆37May 12, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Modified version of MultiStackRegistration, for use from scripts.☆12May 18, 2022Updated 4 years ago
- The OpenLH is a Liquid handling system based on an available robotic arm platform (uARM swift Pro) which allows for creative exploration …☆25Jun 20, 2024Updated last year
- A python package for fitting splines.☆23May 8, 2026Updated 3 weeks ago
- Time-correlated single photon counting (TCSPC) data analysis☆12Jun 15, 2025Updated 11 months ago
- MCP server for searching and surfacing Claude Code conversation history☆65Feb 27, 2026Updated 3 months ago
- Codebase to drive the Perovskite Automated Spin Coat Assembly Line (PASCAL) in the Fenning research group.☆22May 14, 2026Updated 2 weeks ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Updated this week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Apr 13, 2026Updated last month
- My comprehensive, tested + audited, library of skills to use for ChatGPT.☆58Apr 8, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repository contains the specifications for Zarr extensions for Zarr version 3.☆16May 15, 2026Updated 2 weeks ago
- SFML-based flocking simulation program☆15Jan 23, 2025Updated last year
- Zarr Enhancement Proposals☆16Mar 5, 2026Updated 2 months ago
- A drop-in replacement for raw-thumbnailer.☆13Nov 23, 2025Updated 6 months ago
- A brain for self-driving laboratories☆50May 21, 2025Updated last year
- A web-based, time-series visualizer for tracked segmented data.☆15Updated this week
- A tool for manual pointwise deformable registration using bigdataviewer.☆36May 22, 2026Updated last week
- AstrBot 多数据源灾害预警插件,使用 AI 开发,支持地震、海啸、气象预警实时推送。集成中国地震台网、中国气象局气象预警、台湾中央气象署、日本气象厅、USGS、Global Quake等多个数据源。 AstrBot's multi-data source disast…☆65Updated this week
- using Mesh Shaders to generate shading intervals for volume rendering☆14Feb 26, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GitHub repository for the course EE411: Fundamental of Inference and Learning☆13Dec 16, 2025Updated 5 months ago
- Clowder v2 (in development)☆15Mar 18, 2026Updated 2 months ago
- An SWC + Volume/TIFF Stack Viewer in WebGL☆17Apr 26, 2023Updated 3 years ago
- Notion to Postgres sync pipeline with Dagster orchestration☆19Jul 21, 2025Updated 10 months ago
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11Apr 8, 2025Updated last year
- ☆12May 3, 2017Updated 9 years ago
- dask empowered fast4dreg☆16Mar 11, 2026Updated 2 months ago
- Performance benchmarks of Zarr V3 implementations☆19Feb 8, 2026Updated 3 months ago
- ☆12Feb 23, 2026Updated 3 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- DLSS Super Resolution and DLSS Frame Generation via Streamline☆30Aug 27, 2025Updated 9 months ago
- A flexible Python-based GUI for stereotaxic experiment planning.☆12Feb 4, 2026Updated 3 months ago
- A Python-based tool for parallelized conversion of image datasets from various formats to OME-Zarr, with support for distributed processi…☆27May 4, 2026Updated 3 weeks ago
- my own audio visualizer library, because after effects sucks☆13Feb 1, 2026Updated 3 months ago
- ☆14Dec 18, 2024Updated last year
- Smaller or bigger examples that I've written or will write in the future in C++.☆16Jan 23, 2024Updated 2 years ago
- Analyse gigapixel images, annotated with millions of geometries, using a modern, highly-performant web interface.☆19Jan 4, 2026Updated 4 months ago