jtfrey / vscode-shell-proxyLinks
An attempt at proxying vscode remote shell backend through cluster login nodes.
☆15Updated 3 months ago
Alternatives and similar repositories for vscode-shell-proxy
Users that are interested in vscode-shell-proxy are comparing it to the libraries listed below
Sorting:
- Howto and implementation documentation☆22Updated last week
- ☆29Updated last year
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆28Updated 2 weeks ago
- Automatically annotate cell types, consistently across samples.☆14Updated 3 months ago
- A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)☆12Updated last week
- Tabular seff☆84Updated last month
- An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.☆19Updated last week
- A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.☆76Updated last month
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆38Updated 2 weeks ago
- Calibrate and compare methods for denoising single-cell RNA-seq data☆2Updated 4 years ago
- Access public biological ontologies.☆16Updated 11 months ago
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated this week
- A data pipeline built in Nextflow to process spatial and single-cell experiment data for visualisation in WebAtlas☆64Updated 2 weeks ago
- Convert bioinformatics file formats to Zarr☆36Updated last month
- Turn an existing conda environment into a Singularity container☆80Updated 2 years ago
- Image Mass Cytometry analysis pipeline☆26Updated last month
- Probabilistic cell segmentation for in situ spatial transcriptomics☆105Updated this week
- Oxbow makes genomic data ready for high-performance analytics.☆108Updated 3 weeks ago
- Registries for biological entities, coupled to public ontologies.☆16Updated this week
- ☆44Updated last week
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- ☆22Updated 2 years ago
- A simple Snakemake profile for Slurm without --cluster-config☆160Updated last year
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆53Updated 11 months ago
- Agentic Cell type annotation for Anndata objects☆35Updated last week
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆80Updated 3 weeks ago
- Tools for analyzing Slide-seq data☆31Updated last year
- Multimodal Data (.h5mu) implementation for Python☆99Updated last month
- script + metadata = standalone component☆42Updated this week
- Single-cell Graph Cuts Optimization☆16Updated last year