jperkel / gb_readLinks
An example GenBank file reader in Rust
☆36Updated 4 years ago
Alternatives and similar repositories for gb_read
Users that are interested in gb_read are comparing it to the libraries listed below
Sorting:
- Rust utility code☆32Updated last year
- Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.☆129Updated 4 years ago
- A library of common biomedical types.☆40Updated 7 months ago
- Efficient querying of biological databases☆42Updated last month
- Alignment-based gene expression quantification☆30Updated 3 months ago
- A server implementation of the htsget protocol for bioinformatics in Rust☆46Updated 2 weeks ago
- ☆50Updated 3 years ago
- ☆22Updated 3 years ago
- Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.☆21Updated 9 years ago
- ☆57Updated 3 years ago
- Bioinformatics Algorithms implemented in Rust for Learners☆31Updated 4 years ago
- Simple and transparent support for compressed files.☆81Updated 9 months ago
- FASTA and FASTQ parsing in Rust☆79Updated 8 months ago
- A library for easy, fast, and efficient reading & writing of PLINK Bed files☆82Updated 8 months ago
- Single-Cell RNA-seq pseudo-aligner☆52Updated last year
- bgzip support for Rust☆16Updated 2 years ago
- Rust in bioinformatics and computational biology☆19Updated 3 years ago
- Bit-packed and well-typed biological sequences☆37Updated 3 weeks ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Updated 11 months ago
- A Rust library for parsing, writing and manipulating Genbank sequence files☆21Updated 7 months ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated 2 years ago
- A set of command line utilities based on Rust-Bio.☆201Updated last year
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Updated last year
- Parallel Construction of Suffix Arrays in Rust☆26Updated 6 months ago
- Light phylogeny library for Rust☆10Updated last month
- A Rust-based, headless workflow execution framework supporting local, cloud, and HPC.☆44Updated this week
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆31Updated 2 weeks ago
- Rust implmentation of VCF parser☆25Updated 3 years ago
- A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).☆101Updated last week
- Rust wrapper for STAR aligner☆18Updated this week