Alternatives and similar repositories for gb_read

Users that are interested in gb_read are comparing it to the libraries listed below

• rust-bio / rust-bio-types
  A library of common biomedical types.
  ☆40Updated 9 months ago
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆49Updated this week
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆42Updated 3 months ago
• aseyboldt / fastq-rs
  ☆50Updated 3 years ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆32Updated last year
• 10XGenomics / rust-pseudoaligner
  Single-Cell RNA-seq pseudo-aligner
  ☆52Updated last year
• Daniel-Liu-c0deb0t / cute-nucleotides
  Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.
  ☆129Updated 5 years ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆81Updated 10 months ago
• TianyiShi2001 / bioinformatics-algorithms-rs
  Bioinformatics Algorithms implemented in Rust for Learners
  ☆31Updated 4 years ago
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆35Updated 5 months ago
• COMBINE-lab / terminus
  ☆57Updated 3 years ago
• stjude-rust-labs / crankshaft
  A Rust-based, headless workflow execution framework supporting local, cloud, and HPC.
  ☆47Updated last week
• TravisWheelerLab / sufr
  Parallel Construction of Suffix Arrays in Rust
  ☆26Updated 8 months ago
• luizirber / niffler
  Simple and transparent support for compressed files.
  ☆81Updated 11 months ago
• informationsea / bgzip-rs
  bgzip support for Rust
  ☆17Updated 2 years ago
• dlesl / gb-io
  A Rust library for parsing, writing and manipulating Genbank sequence files
  ☆21Updated 9 months ago
• fastlmm / bed-reader
  A library for easy, fast, and efficient reading & writing of PLINK Bed files
  ☆82Updated 10 months ago
• arewebioyet / arewebioyet.github.io
  Rust in bioinformatics and computational biology
  ☆19Updated 3 years ago
• jeff-k / bio-seq
  Bit-packed and well-typed biological sequences
  ☆45Updated last week
• luizirber / 2018-python-rust
  This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.
  ☆20Updated 7 years ago
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated 2 years ago
• anp / parasailors
  Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.
  ☆21Updated 9 years ago
• 38 / grass
  ☆22Updated 3 years ago
• informationsea / vcf-rs
  Rust implmentation of VCF parser
  ☆26Updated 3 years ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆47Updated last year
• rust-bio / rust-bio-tools
  A set of command line utilities based on Rust-Bio.
  ☆205Updated last year
• 10XGenomics / fastq_set
  Tools for working FASTQ files from sequencers (R1/R2/I1/I2)
  ☆12Updated last year
• 10XGenomics / orbit
  Rust wrapper for STAR aligner
  ☆18Updated last week
• stjude-rust-labs / sprocket
  A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
  ☆116Updated this week
• nh13 / fqme
  ☆21Updated last month