jperkel / gb_readLinks
An example GenBank file reader in Rust
☆36Updated 4 years ago
Alternatives and similar repositories for gb_read
Users that are interested in gb_read are comparing it to the libraries listed below
Sorting:
- Rust utility code☆32Updated 2 years ago
- A library of common biomedical types.☆40Updated 9 months ago
- Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.☆129Updated 5 years ago
- Efficient querying of biological databases☆42Updated 3 months ago
- A server implementation of the htsget protocol for bioinformatics in Rust☆49Updated last week
- Bioinformatics Algorithms implemented in Rust for Learners☆31Updated 4 years ago
- A set of command line utilities based on Rust-Bio.☆205Updated last year
- ☆57Updated 3 years ago
- Single-Cell RNA-seq pseudo-aligner☆52Updated last year
- ☆51Updated 3 years ago
- FASTA and FASTQ parsing in Rust☆82Updated 10 months ago
- Rust wrapper for STAR aligner☆19Updated last week
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Updated last year
- Alignment-based gene expression quantification☆35Updated this week
- A Rust-based, headless workflow execution framework supporting local, cloud, and HPC.☆47Updated this week
- Bit-packed and well-typed biological sequences☆45Updated 3 weeks ago
- bgzip support for Rust☆17Updated 2 years ago
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated 2 years ago
- ☆22Updated 3 years ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Updated last year
- A Rust library for parsing, writing and manipulating Genbank sequence files☆21Updated 9 months ago
- Simple and transparent support for compressed files.☆81Updated 11 months ago
- This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.☆20Updated 7 years ago
- Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.☆21Updated 9 years ago
- Rust in bioinformatics and computational biology☆19Updated 3 years ago
- Fast interval intersection library☆44Updated 5 months ago
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Updated 10 months ago
- ☆14Updated 5 years ago
- Simple terminal alignment viewer☆85Updated last week
- Command line utility for working with next-generation sequencing files.☆37Updated 7 months ago