jperkel / gb_readLinks
An example GenBank file reader in Rust
☆35Updated 4 years ago
Alternatives and similar repositories for gb_read
Users that are interested in gb_read are comparing it to the libraries listed below
Sorting:
- Rust utility code☆32Updated last year
- A library of common biomedical types.☆39Updated 6 months ago
- Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.☆128Updated 4 years ago
- ☆50Updated 3 years ago
- Efficient querying of biological databases☆42Updated last week
- A server implementation of the htsget protocol for bioinformatics in Rust☆46Updated this week
- A set of command line utilities based on Rust-Bio.☆199Updated last year
- FASTA and FASTQ parsing in Rust☆78Updated 7 months ago
- Alignment-based gene expression quantification☆28Updated 2 months ago
- ☆57Updated 3 years ago
- Simple and transparent support for compressed files.☆80Updated 8 months ago
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- ☆22Updated 3 years ago
- Bioinformatics Algorithms implemented in Rust for Learners☆31Updated 4 years ago
- Bit-packed and well-typed biological sequences☆37Updated 3 weeks ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Updated 10 months ago
- A library for easy, fast, and efficient reading & writing of PLINK Bed files☆81Updated 7 months ago
- Rust wrapper for STAR aligner☆18Updated this week
- Rust bindings to parasail, a SIMD-accelerated pairwise sequence alignment library.☆21Updated 9 years ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Updated last year
- bgzip support for Rust☆16Updated last year
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated 2 years ago
- A Rust library for parsing, writing and manipulating Genbank sequence files☆21Updated 6 months ago
- The D4 Quantitative Data Format☆167Updated 6 months ago
- A genomic minhashing implementation in Rust☆99Updated 4 months ago
- Rust crates for working with Workflow Description Language (WDL) documents.☆58Updated last month
- This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.☆20Updated 7 years ago
- Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.☆129Updated this week
- Parallel Construction of Suffix Arrays in Rust☆26Updated 6 months ago
- A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).☆96Updated this week