jorvis / GALES
Genomic Annotation Logic and Execution System
☆9Updated last year
Alternatives and similar repositories for GALES:
Users that are interested in GALES are comparing it to the libraries listed below
- A collection of publications on comparison of high-throughput sequencing technologies.☆26Updated 2 months ago
- Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel☆28Updated 6 months ago
- Tandem Repeat Annotation Library☆25Updated 2 years ago
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Updated last year
- Annotating principal splice isoforms☆14Updated 5 months ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- Project Manager for NGS data analysis☆30Updated 2 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- cache packages permanently☆13Updated 8 months ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 5 years ago
- The Ensembl Variation Perl API and SQL schema☆28Updated this week
- small RNA analysis from NGS data☆37Updated 6 months ago
- SQL-like query language for the SAM/BAM file format☆28Updated last year
- List of computational resources for analyzing microbial sequencing data.☆68Updated last year
- Tools and utilities for running Dockerized metagenomics tools in the Cloud☆22Updated 5 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- Freelance bioinformaticians directory☆9Updated 2 years ago
- ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…☆23Updated 4 months ago
- Convert genetic variants to minimal representation☆23Updated 7 years ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆63Updated this week
- Workflows I find helpful for fungal genome annotation☆21Updated last year
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 4 years ago
- (WIP) best-practices workflow for rare disease☆60Updated 8 months ago
- Scripts, utilities and programs for genomic bioinformatics.☆82Updated last month
- A method for variant graph genotyping based on exact alignment of k-mers☆87Updated 5 years ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- ☆26Updated 2 years ago
- Nextflow Tower CLI tool☆48Updated 2 weeks ago
- Genome Annotation Library - A perl toolkit for working with SO compliant genome annotations☆17Updated last month