A4Bio / ProteinInvBenchLinks
The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics
☆199Updated last year
Alternatives and similar repositories for ProteinInvBench
Users that are interested in ProteinInvBench are comparing it to the libraries listed below
Sorting:
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆183Updated 2 years ago
- ☆212Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆111Updated 2 years ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆103Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆124Updated 11 months ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆101Updated last year
- The official implementation of the ICLR'24 paper RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-base…☆51Updated last year
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆99Updated 2 years ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆102Updated 8 months ago
- GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)☆314Updated 7 months ago
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆207Updated 9 months ago
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆182Updated last week
- ☆41Updated 3 years ago
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆146Updated 8 months ago
- ☆78Updated 11 months ago
- The official implementation of the ICASSP'2023 paper Global-context aware generative protein design.☆27Updated 2 years ago
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆317Updated 2 months ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆69Updated last year
- The first large protein language model trained follows structure instructions.☆94Updated 8 months ago
- Official repository for MolCRAFT series☆139Updated 3 months ago
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆162Updated 4 years ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆106Updated 9 months ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆82Updated last year
- ☆35Updated 10 months ago
- Open source code for TankBind. Galixir Tenchnologies☆173Updated 2 years ago
- ☆130Updated 3 years ago
- Codes for our paper "UniMoMo: Unified Generative Modeling of 3D Molecules for De Novo Binder Design" (ICML 2025)☆82Updated last month
- Papers about Structure-based Drug Design (SBDD)☆139Updated 5 months ago
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆99Updated 2 years ago
- ☆84Updated 8 months ago