Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network (GNN)-based model that uses knowledge graph for SL prediction.
☆36Aug 1, 2023Updated 3 years ago
Alternatives and similar repositories for KG4SL
Users that are interested in KG4SL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Benchmarking study of machine learning methods for prediction of synthetic lethality☆22Nov 15, 2024Updated last year
- PiLSL is a pairwise interaction learning-based graph neural network (GNN) model for prediction of synthetic lethality (SL) as anti-cancer…☆14Dec 4, 2024Updated last year
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆29Aug 7, 2026Updated 3 months ago
- ☆12Feb 10, 2023Updated 3 years ago
- ☆20Jun 14, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated 2 years ago
- Example notebooks that illustrate how to generate knowledge-based features. Features can be used in a variety of ML models, including rec…☆12Feb 23, 2022Updated 4 years ago
- ☆13Nov 15, 2020Updated 5 years ago
- The source code for "MG-BERT: Multi-Graph Augmented BERT for Masked Language Modeling" paper (NAACL 2021, TextGraphs-15).☆12Jun 11, 2021Updated 5 years ago
- code for Gogleva et al manuscript☆48Nov 30, 2022Updated 3 years ago
- ☆36Jun 3, 2021Updated 5 years ago
- Bias-controlled 3D generative framework for structure-based ligand design☆17Nov 2, 2022Updated 4 years ago
- ☆12Mar 16, 2024Updated 2 years ago
- A VGAE-based model to infer transcription factor regulatory network☆29Jul 25, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ipython notebook for blog post entry☆12Jul 12, 2017Updated 9 years ago
- Latest version of IFISS software☆11Dec 27, 2025Updated 10 months ago
- An FL Studio piano roll script that uses OpenAI's GPT to help you edit and create notes using natural language.☆12Apr 3, 2024Updated 2 years ago
- Precompiled Windows binaries for GROMACS☆12May 10, 2022Updated 4 years ago
- A cloud-based deployment of the 10x Genomics Cell Ranger software☆14Jul 7, 2019Updated 7 years ago
- Molecular Structure Generation☆35Aug 13, 2024Updated 2 years ago
- A simulation framework to analyze signal flows in complex networks☆15Jun 11, 2026Updated 5 months ago
- ☆12Nov 20, 2025Updated 11 months ago
- A Data-Driven Approach to Predicting Successes and Failures of Clinical Trials☆22Oct 19, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆17Mar 23, 2021Updated 5 years ago
- Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis☆11May 1, 2023Updated 3 years ago
- ☆11Apr 4, 2014Updated 12 years ago
- Similarity Ensemble Approach with deep learning substance fingerprints☆63Aug 10, 2016Updated 10 years ago
- Deep learning for compound price prediction☆19Aug 22, 2024Updated 2 years ago
- Manipulate KEGG networks as NetworkX objects in in Python☆10Jan 21, 2022Updated 4 years ago
- Python - 100天从新手到大师☆12Feb 29, 2024Updated 2 years ago
- A modification of the BRIEF descriptor permitting an online rotation of the extraction pattern (useful if some knowledge of the orientati…☆11Oct 6, 2013Updated 13 years ago
- The code is for our AAAI2023 paper: Efficient Embeddings of Logical Variables for Query Answering over Incomplete Knowledge Graphs (Ding…☆10Dec 17, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code from 'Uncovering the Folding Landscape of RNA Secondary Structure with Deep Graph Embeddings"☆10Aug 19, 2024Updated 2 years ago
- ☆32Jan 16, 2020Updated 6 years ago
- VcfExplorer regroups several programs which principal aims are to map DNA and RNAseq data onto reference genome sequence, perform variant…☆16Apr 15, 2026Updated 6 months ago
- library for interfacing with NCBI's Entrez eUtils web service☆11Aug 23, 2012Updated 14 years ago
- Official code for the publication "HyFactor: Hydrogen-count labelled graph-based defactorization Autoencoder".☆17Jan 17, 2023Updated 3 years ago
- Gene- and Pathway-based Framework for Multi-omics Data Intergration☆10Jan 21, 2022Updated 4 years ago
- MeSH Enrichment and Semantic analyses☆13Sep 28, 2026Updated last month
Are these results useful?