violet-sto / TGSA
PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarity Augmentation"
☆24Updated 3 years ago
Alternatives and similar repositories for TGSA:
Users that are interested in TGSA are comparing it to the libraries listed below
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆25Updated 3 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- ☆46Updated 5 months ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆15Updated last year
- Multi-modal co-attention for drug-target interaction annotation and Its Application to SARS-CoV-2☆16Updated last year
- ☆14Updated 2 years ago
- ☆12Updated 10 months ago
- ☆50Updated 6 months ago
- ☆25Updated 3 years ago
- ☆83Updated last year
- SGPPI: structure-aware prediction of protein-protein interactions in rigorous conditions with graph convolutional network☆15Updated 2 years ago
- ☆46Updated 5 months ago
- ☆34Updated 11 months ago
- ☆26Updated last month
- codes for KPGT (Knowledge-guided Pre-training of Graph Transformer)☆100Updated 5 months ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆76Updated 3 years ago
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆114Updated 2 years ago
- ☆18Updated 11 months ago
- BridgeDPI: A Novel Graph Neural Network for Predicting Drug-Protein Interactions☆19Updated last month
- ☆16Updated 3 years ago
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆34Updated 3 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆29Updated 2 years ago
- ☆25Updated 3 years ago
- Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction☆36Updated last year
- ☆3Updated 2 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated last year
- This is The repository for Paper "AttentionSiteDTI: Attention Based Model for Predicting Drug-Target Interaction Using Graph Representati…☆43Updated last year
- AGILE Platform: A Deep Learning-Powered Approach to Accelerate LNP Development for mRNA Delivery☆33Updated this week
- ☆32Updated 8 months ago