Alternatives and similar repositories for AB-Bind-Database

Users that are interested in AB-Bind-Database are comparing it to the libraries listed below

• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆67Updated 4 months ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆52Updated 4 months ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆29Updated last year
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆59Updated 9 months ago
• dahjan / DMS_opt
  ☆73Updated 5 years ago
• wendao / CAGE-Prox
  Computer aided proximal decaging as a universal strategy for temporal protein activation
  ☆24Updated 5 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆77Updated 3 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆24Updated last year
• dina-lab3D / NanoNet
  ☆50Updated 2 years ago
• ELELAB / RosettaDDGPrediction
  ☆81Updated 9 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆47Updated last month
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated 3 weeks ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆63Updated 2 years ago
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆115Updated last year
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 5 years ago
• JinyuanSun / DDGScan
  DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein
  ☆49Updated last year
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆126Updated last week
• matteoferla / rdkit_to_params
  Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file
  ☆35Updated 4 months ago
• oxpig / dlab-public
  Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
  ☆31Updated 3 years ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆57Updated 6 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆36Updated 2 years ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆80Updated 4 months ago
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆85Updated 3 months ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆33Updated 2 years ago
• Kuhlman-Lab / evopro
  ☆91Updated last month
• Liuxg16 / GeoPPI
  ☆87Updated 3 years ago
• jproney / AF2Rank
  ☆114Updated 2 years ago
• hefeda / PGP
  ☆41Updated 2 months ago