Alternatives and similar repositories for AB-Bind-Database

Users that are interested in AB-Bind-Database are comparing it to the libraries listed below

• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆34Updated 5 years ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 11 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆56Updated last month
• dina-lab3D / NanoNet
  ☆46Updated last year
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆48Updated 2 years ago
• dahjan / DMS_opt
  ☆69Updated 4 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆31Updated 2 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 11 months ago
• duerrsimon / folding_tools
  A collection of *fold* tools
  ☆21Updated 2 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆59Updated 2 years ago
• AbSciBio / igdesign
  ☆41Updated 5 months ago
• oxpig / dlab-public
  Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
  ☆31Updated 2 years ago
• mit-ll / AlphaSeq_Antibody_Dataset
  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide
  ☆22Updated 2 years ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆42Updated 2 years ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆73Updated 5 months ago
• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 3 years ago
• Kuhlman-Lab / evopro
  ☆81Updated last week
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆64Updated 3 years ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆58Updated 7 months ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆28Updated 10 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆32Updated last year
• regeneron-mpds / propermab
  ☆27Updated 2 months ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆71Updated 4 years ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆62Updated 4 months ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 3 years ago
• idlutz / protein-backbone-MCTS
  ☆49Updated last year
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆56Updated 6 months ago