ericmjl / CircosLinks
☆15Updated 2 years ago
Alternatives and similar repositories for Circos
Users that are interested in Circos are comparing it to the libraries listed below
Sorting:
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 2 weeks ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 7 years ago
- Library for manipulating genomic variants and predicting their effects☆84Updated last year
- Efficient handling of FASTQ files from Python☆51Updated this week
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- A client for the Ensembl REST API written in the Python programming language☆27Updated last month
- Railroadtracks is a Python package to handle connected computation steps for DNA and RNA Seq.☆14Updated 10 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- Training material for intermediate R / Bioconductor courses☆17Updated 2 years ago
- Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statisticall…☆37Updated 4 months ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- Flexible Integration of Data with Deep LEarning☆50Updated 2 years ago
- Tutorials for the InterMine Python web client☆14Updated 3 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆16Updated 7 years ago
- Python biomart API☆67Updated 2 years ago
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Updated 7 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆70Updated 2 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Updated 6 years ago
- Fishers Exact Test for Python (Cython)☆66Updated 4 months ago
- IPython notebooks to teach Genomics and Population Genetics☆21Updated 8 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆64Updated 4 years ago
- Plot categorical heatmaps with seaborn☆18Updated 2 years ago
- Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.☆41Updated 5 months ago
- python access to UCSC genomes database☆136Updated 4 years ago
- Materials for GCB535 at Penn.☆20Updated 6 years ago
- A python package for pathway visualization☆38Updated 4 years ago
- SevenBridges Python Api bindings☆46Updated 5 months ago
- Predicting the impact of mutations on kinase–substrate phosphorylation☆10Updated 2 years ago