Torrent Mapping Alignment Program
☆50Feb 20, 2014Updated 12 years ago
Alternatives and similar repositories for TMAP
Users that are interested in TMAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Torrent Suite☆49Apr 30, 2024Updated 2 years ago
- A configurable de novo assembly pipeline☆30Jun 29, 2016Updated 10 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Isaac Genome Alignment Software☆36Apr 7, 2015Updated 11 years ago
- Infrastructure code to support DNA pipeline☆38May 5, 2015Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆24Apr 15, 2021Updated 5 years ago
- Torrent Mapping Alignment Program☆20Mar 2, 2013Updated 13 years ago
- IPython Integration into Galaxy☆31Jan 22, 2019Updated 7 years ago
- Nextera Long Mate Pair analysis and processing tool☆18Mar 26, 2020Updated 6 years ago
- A powerful toolset for genome arithmetic.☆143May 28, 2021Updated 5 years ago
- A Python interface to the BEDTools API using Cython☆28Mar 16, 2011Updated 15 years ago
- High throughput sequencing analysis tools☆30Apr 21, 2025Updated last year
- A method to identify structural variation from sequencing data in target regions☆32Sep 23, 2020Updated 6 years ago
- Tools for bam file processing☆56Apr 20, 2015Updated 11 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- DeeNA Zip (SAM/BAM compression tool)☆13May 25, 2019Updated 7 years ago
- A tool to easily create informative genomic feature plots☆17Dec 26, 2022Updated 3 years ago
- Reference-based compression of SRA data☆40Mar 26, 2013Updated 13 years ago
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Oct 1, 2013Updated 12 years ago
- MetaPORE – Chiu Laboratory, University of California, San Francisco☆12Nov 4, 2015Updated 10 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆20Sep 28, 2022Updated 3 years ago
- perform genotype-phenotype-association tests on a VCF with logistic regression.☆20Dec 15, 2015Updated 10 years ago
- ☆36Aug 13, 2020Updated 6 years ago
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Feb 24, 2017Updated 9 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Toolkit to analyze genomic variation data, built on the GATK with Clojure☆66Nov 2, 2015Updated 10 years ago
- Simple script to generate whole-genome coverage plots☆19Jun 23, 2015Updated 11 years ago
- Haplotype-based somatic genome simulator☆10Apr 20, 2026Updated 5 months ago
- ☆13Feb 19, 2017Updated 9 years ago
- Little sequence file utilities meant to work within Unix pipelines☆36Jan 20, 2015Updated 11 years ago
- variant discovery and annotation using GATK and Ensembl☆17Jun 27, 2013Updated 13 years ago
- A WGS de novo assembler based on the FMD-index for large genomes☆74Dec 6, 2013Updated 12 years ago
- A 3'-end adapter contaminant trimmer☆98Jan 23, 2018Updated 8 years ago
- The gkno launcher for executing tools or pipelines☆31Jan 17, 2017Updated 9 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 10 months ago
- Web-based management of genetic variation data☆16Aug 18, 2022Updated 4 years ago
- Assembly Based ReAligner☆75May 24, 2018Updated 8 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 9 years ago
- ThermoAlign: software for automated primer design☆27Apr 14, 2018Updated 8 years ago
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- de novo sequence assembler using string graphs☆244Aug 8, 2019Updated 7 years ago