iontorrent / sdk-docsLinks
Ion Torrent SDK Docs
☆10Updated 3 years ago
Alternatives and similar repositories for sdk-docs
Users that are interested in sdk-docs are comparing it to the libraries listed below
Sorting:
- SV caller for nanopore data☆92Updated 5 years ago
- Read visualizer for structural variants☆84Updated 7 years ago
- Workflows for germline short variant discovery in WGS data. PairedEndSingleSampleWf has been superseded in Broad production by https://gi…☆57Updated 5 years ago
- NEAT read simulation tools☆101Updated 3 years ago
- Scalable gVCF merging and joint variant calling for population sequencing projects☆174Updated last year
- De novo assembly based variant calling pipeline for Illumina short reads☆110Updated 5 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Updated 6 years ago
- Simple vcf parser, based on PyVCF☆48Updated 7 years ago
- A tool to genotype CYP2D6 with WGS data☆55Updated 2 years ago
- Assembly Based ReAligner☆74Updated 7 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆52Updated 5 years ago
- ☆81Updated 7 years ago
- ☆49Updated last year
- an empirical Bayesian framework for mutation detection from cancer genome sequencing data☆31Updated 9 years ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆85Updated last month
- ☆57Updated 5 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 5 years ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆99Updated last year
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- Tools for early stage alignment file processing☆95Updated 6 years ago
- Data and information about the Polaris study☆55Updated 6 years ago
- ☆55Updated 5 years ago
- Calling star alleles in highly polymorphic pharmacogenes (e.g. CYP450 genes) by leveraging genome graph-based variant detection.☆35Updated 3 months ago
- LoFreq Star: Sensitive variant calling from sequencing data☆110Updated 3 months ago
- A suite of tools for detecting expansions of short tandem repeats☆85Updated 2 years ago
- Thousand Variant Callers Project Repository☆73Updated 6 years ago
- VCF-kit: Assorted utilities for the variant call format☆132Updated 7 months ago
- Detection of CNVs (deletion/duplication) in target panel based NGS data☆16Updated 2 years ago
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…☆71Updated this week