intermine / intermine-ws-python-docsLinks
Tutorials for the InterMine Python web client
☆14Updated 3 years ago
Alternatives and similar repositories for intermine-ws-python-docs
Users that are interested in intermine-ws-python-docs are comparing it to the libraries listed below
Sorting:
- Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.☆116Updated last month
- Library for manipulating genomic variants and predicting their effects☆84Updated last year
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 2 weeks ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆64Updated 4 years ago
- Core functionality of the CGAT code☆33Updated this week
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated last week
- Scalable RNA-seq analysis☆73Updated 4 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Python biomart API☆67Updated 2 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- ☆19Updated 3 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆38Updated this week
- GeneMANIA helps you predict the function of your favourite genes and gene sets.☆43Updated last year
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Updated 6 years ago
- R package for InterMine☆18Updated 3 years ago
- IPAW: a Nextflow workflow for proteogenomics☆28Updated last year
- A quick and flexible single-cell RNA-seq processing framework on the cloud☆39Updated 5 years ago
- An interactive web-tool for RNA-seq analysis☆68Updated 5 months ago
- Project Manager for NGS data analysis☆31Updated 2 years ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- 3D hotspot mutation proximity analysis tool☆47Updated 2 years ago
- ☆41Updated 7 years ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- conda recipes for genomic data☆85Updated 4 years ago
- A simple pythonic interface to biomart.☆56Updated 5 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated 5 months ago
- A catalog of appyter notebooks☆37Updated this week
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated 2 years ago
- Efficient handling of FASTQ files from Python☆51Updated this week
- Anatomogram illustrating Expression Atlas experiments☆44Updated 5 years ago