A catalog of appyter notebooks
☆42May 19, 2026Updated 5 months ago
Alternatives and similar repositories for appyter-catalog
Users that are interested in appyter-catalog are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MODAS: Multi-Omics Data Association Study toolkit☆21Nov 21, 2024Updated last year
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 7 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Analysis pipelines for cancer genome sequencing in mice.☆23Jun 19, 2026Updated 4 months ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 6 years ago
- SCelVis - web-based visualization of single-cell data. Demo☆22Mar 20, 2024Updated 2 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Python package to load and query ARCHS4 data☆31Jul 6, 2026Updated 4 months ago
- Snakemake Tutorial for NGSSchool.☆10Aug 31, 2020Updated 6 years ago
- Statistical and computational analysis of the human genome☆15Sep 22, 2021Updated 5 years ago
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 7 months ago
- Easily GPU accelerate essential genomics analysis workflows, such as Germline, by using NVIDIA Parabricks.☆14May 8, 2026Updated 5 months ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics☆17Aug 25, 2022Updated 4 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Oct 16, 2026Updated 3 weeks ago
- Repository☆10Oct 23, 2024Updated 2 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 5 years ago
- Convert arbitrary EHR extracts to FHIR.☆13Apr 27, 2022Updated 4 years ago
- ☆18Nov 26, 2023Updated 2 years ago
- lncRNA-screen☆25Apr 19, 2017Updated 9 years ago
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆22Jun 12, 2023Updated 3 years ago
- ☆28Sep 20, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Galaxy Docker Image for the HiCExplorer☆11Mar 3, 2019Updated 7 years ago
- Statistical Rethinking Course 2024 with Python☆10Jan 7, 2024Updated 2 years ago
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19May 16, 2025Updated last year
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 9 years ago
- Dockerfile to build a working CellProfiler (http://cellprofiler.org/) image☆11Jun 2, 2022Updated 4 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- A tool to visualize the haplotype pattern and various information in excel.☆25Mar 5, 2025Updated last year
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 6 years ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆15May 1, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jul 18, 2026Updated 3 months ago
- Code and data related to the meta-analysis of fat distribution in UK Biobank and GIANT☆23Dec 5, 2018Updated 7 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 3 years ago
- ☆10May 17, 2022Updated 4 years ago
- ☆10Mar 4, 2025Updated last year
- ☆12Jun 12, 2023Updated 3 years ago
- A curated list (with links) of useful tools for genome-wide association analysis.☆11Mar 1, 2019Updated 7 years ago