sussmanLab / cellGPULinks
GPU-accelerated simulations of Voronoi and vertex models of cells. Initial version published in Computer Physics Communications: https://doi.org/10.1016/j.cpc.2017.06.001
☆23Updated 6 months ago
Alternatives and similar repositories for cellGPU
Users that are interested in cellGPU are comparing it to the libraries listed below
Sorting:
- Soft Active Matter on Surfaces☆31Updated 9 months ago
- Python implementation of Langevin inference methods from time series.☆35Updated 3 months ago
- KITP tutorial codes for Active Brownian Particles☆13Updated 2 months ago
- Multiblob method for rigid bodies☆37Updated 3 months ago
- Tutorial on "Simulations of pattern formation in biological cells"☆13Updated 8 months ago
- Class materials for computational physics course☆164Updated 2 months ago
- Python implementation of Underdamped Langevin Inference, a method to infer the dynamical equation of underdamped stochastic systems from …☆16Updated 6 months ago
- PyStokes: phoresis and Stokesian hydrodynamics in Python. github.com/rajeshrinet/pystokes☆48Updated 9 months ago
- RHEOS - Open Source Rheology data analysis software☆53Updated 8 months ago
- A Python module for fast computation of 2D and 3D radial distribution functions (RDFs).☆31Updated 2 years ago
- custom LAMMPS fix used for Brownian Dynamics Simulation (Overdamped Langevin)☆17Updated 4 years ago
- Numerically solve the Fokker-Planck equation in N dimensions☆97Updated 3 months ago
- Hydrodynamic Cytoskeleton Simulator☆28Updated last year
- Implementation of Stokesian Dynamics in Python☆37Updated 9 months ago
- 3D computational model for lipid membranes☆27Updated 11 months ago
- A python code to calculate the Brownian motion of colloidal particles in a time varying force field.☆20Updated last year
- Differentiable physics framework for voxel-based microstructure simulations☆21Updated last week
- A CUDA project for Molecular Dynamics, Brownian Dynamics, Hydrodynamics... intended to simulate a very generic system constructing a simu…☆62Updated 3 months ago
- Linux productivity tools and practices for researchers☆88Updated 3 weeks ago
- andi_datasets provides functions to generate, save, load and manipulate datasets of diffusion anomalous trajectories. It is part of the A…☆34Updated last month
- Learning materials for scientific software development☆92Updated last month
- Uncertainty Quantification, Decision Making under Uncertainty, Stochastic Modeling, HPC Optimization☆28Updated 2 months ago
- Gaussian process augmented with a probabilistic model of expected system's behavior☆15Updated 3 years ago
- The amazing Reaction Mechanism Simulator for simulating large chemical kinetic mechanisms☆87Updated last month
- A fast direct solver for surface PDEs☆19Updated last month
- Chemical Reaction Neural Network☆98Updated 4 months ago
- Python version of Rick Chartrand's algorithm for numerical differentiation of noisy data☆74Updated 5 years ago
- Modeling toolkit for biochemical simulation☆81Updated 11 months ago
- Interacting Active Surfaces☆10Updated 3 years ago
- A Python package for multipole expansions of electrostatic or gravitational potentials☆44Updated last year