hpcaitech / FastFold
Optimizing AlphaFold Training and Inference on GPU Clusters
☆594Updated 7 months ago
Alternatives and similar repositories for FastFold:
Users that are interested in FastFold are comparing it to the libraries listed below
- An open-source platform for developing protein models beyond AlphaFold.☆382Updated 8 months ago
- OmegaFold Release Code☆567Updated 2 years ago
- An all-atom protein structure dataset for machine learning.☆349Updated 11 months ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆2,925Updated 2 weeks ago
- Diffusion models of protein structure; trigonometry and attention are all you need!☆536Updated last year
- A trainable PyTorch reproduction of AlphaFold 3.☆978Updated this week
- This package contains deep learning models and related scripts for RoseTTAFold☆2,106Updated last year
- Trainable AlphaFold implementation in JAX☆159Updated 2 years ago
- Code for the ProteinMPNN paper☆1,185Updated 6 months ago
- To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released☆1,596Updated 2 years ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆351Updated 9 months ago
- Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch☆781Updated last month
- A collection of *fold* tools☆294Updated 5 months ago
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,187Updated 6 months ago
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆547Updated 7 months ago
- Code for running RFdiffusion☆2,054Updated 6 months ago
- An implementation of the DeepMind's AlphaFold based on PyTorch for research☆394Updated 4 years ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆159Updated last year
- Protein Graph Library☆1,070Updated last week
- Making Protein folding accessible to all!☆2,140Updated last week
- Official release of the ProGen models☆638Updated last year
- Making Protein Design accessible to all via Google Colab!☆694Updated 2 weeks ago
- Remote protein homology detection suite.☆560Updated 4 months ago
- ☆696Updated 7 months ago
- ColabFold on your local PC☆660Updated this week
- ☆92Updated 11 months ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆348Updated last year
- A powerful and flexible machine learning platform for drug discovery☆1,480Updated 7 months ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆252Updated last year
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆158Updated 2 years ago