Optimizing AlphaFold Training and Inference on GPU Clusters
☆616Jul 16, 2024Updated 2 years ago
Alternatives and similar repositories for FastFold
Users that are interested in FastFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An open-source platform for developing protein models beyond AlphaFold.☆421Jun 26, 2024Updated 2 years ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,420Dec 16, 2025Updated 8 months ago
- OmegaFold Release Code☆627Dec 12, 2022Updated 3 years ago
- ☆212Apr 21, 2025Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆189Apr 21, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Making Protein folding accessible to all!☆2,893Updated this week
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated 2 years ago
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,169Feb 7, 2024Updated 2 years ago
- Making Protein Design accessible to all via Google Colab!☆934Updated this week
- Attempt at reproduction of AlphaFold2☆99Jul 30, 2026Updated last month
- ☆78Oct 17, 2022Updated 3 years ago
- Diffusion models of protein structure; trigonometry and attention are all you need!☆565Dec 12, 2023Updated 2 years ago
- A collection of *fold* tools☆303Aug 8, 2025Updated last year
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,286Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆426Jul 20, 2026Updated last month
- An all-atom protein structure dataset for machine learning.☆366Mar 16, 2024Updated 2 years ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆176Sep 8, 2024Updated last year
- Compressing protein structures effectively with torsion angles☆194Aug 3, 2026Updated 3 weeks ago
- This package contains deep learning models and related scripts for RoseTTAFold☆2,258Feb 15, 2024Updated 2 years ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆99Aug 29, 2023Updated 3 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆423Jul 3, 2023Updated 3 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆173Feb 25, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Repository for publicly available deep learning models developed in Rosetta community☆123Sep 18, 2021Updated 4 years ago
- ☆121Dec 7, 2022Updated 3 years ago
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- ☆137Sep 14, 2022Updated 3 years ago
- Code for the ProteinMPNN paper☆1,835Aug 14, 2024Updated 2 years ago
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆260Sep 22, 2023Updated 2 years ago
- Trainable AlphaFold implementation in JAX☆158Aug 6, 2022Updated 4 years ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆179Apr 6, 2023Updated 3 years ago
- Protein hallucination and inpainting with RoseTTAFold☆285Mar 30, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Jun 18, 2021Updated 5 years ago
- Open source code for AlphaFold 2.☆14,818Apr 22, 2026Updated 4 months ago
- To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released☆1,636Oct 29, 2022Updated 3 years ago
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆2,041Aug 1, 2026Updated 3 weeks ago
- Remote protein homology detection suite.☆629Aug 12, 2025Updated last year
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,571May 2, 2025Updated last year
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆368Jun 29, 2023Updated 3 years ago