dptech-corp / Uni-Fold-jax
Trainable AlphaFold implementation in JAX
☆159Updated 2 years ago
Alternatives and similar repositories for Uni-Fold-jax
Users that are interested in Uni-Fold-jax are comparing it to the libraries listed below
Sorting:
- ☆92Updated last year
- An open-source platform for developing protein models beyond AlphaFold.☆392Updated 10 months ago
- Open source code for TankBind. Galixir Tenchnologies☆154Updated last year
- an efficient distributed PyTorch framework☆136Updated this week
- Uni-Dock: a GPU-accelerated molecular docking program☆227Updated last month
- Protein Language Model☆117Updated last year
- ☆77Updated 2 years ago
- Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation☆121Updated 2 years ago
- A package to predict protein inter-residue geometries from sequence data☆216Updated 3 years ago
- An all-atom protein structure dataset for machine learning.☆350Updated last year
- ☆130Updated 2 years ago
- A protein 3D structure prediction application☆65Updated 4 years ago
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆158Updated 2 years ago
- ☆185Updated 7 months ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆173Updated 2 years ago
- Implementation of Learning Gradient Fields for Molecular Conformation Generation (ICML 2021).☆165Updated 3 years ago
- Exploring Evolution-aware & free protein language models as protein function predictors☆64Updated 7 months ago
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆290Updated last year
- Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure☆278Updated 2 years ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆168Updated last year
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆240Updated last year
- trRosetta for protein design☆179Updated 3 years ago
- Accurately speed up AutoDock Vina☆149Updated last year
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆144Updated 4 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆100Updated 2 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆177Updated last year
- Protein hallucination and inpainting with RoseTTAFold☆258Updated 2 years ago
- A collection of *fold* tools☆293Updated 7 months ago
- open source repository☆137Updated last year
- RoseTTAFold2 protein/nucleic acid complex prediction☆358Updated 11 months ago