dptech-corp / Uni-Fold-jaxLinks
Trainable AlphaFold implementation in JAX
☆159Updated 3 years ago
Alternatives and similar repositories for Uni-Fold-jax
Users that are interested in Uni-Fold-jax are comparing it to the libraries listed below
Sorting:
- ☆92Updated last year
- An open-source platform for developing protein models beyond AlphaFold.☆397Updated last year
- an efficient distributed PyTorch framework☆147Updated 2 months ago
- A protein 3D structure prediction application☆67Updated 4 years ago
- Open source code for TankBind. Galixir Tenchnologies☆165Updated last year
- Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation☆124Updated 2 years ago
- Protein Language Model☆119Updated last year
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆160Updated 2 years ago
- ☆78Updated 2 years ago
- A package to predict protein inter-residue geometries from sequence data☆217Updated 3 years ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆177Updated 2 years ago
- ☆130Updated 3 years ago
- Attempt at reproduction of AlphaFold2☆97Updated 11 months ago
- An all-atom protein structure dataset for machine learning.☆355Updated last year
- Implementation of Learning Gradient Fields for Molecular Conformation Generation (ICML 2021).☆169Updated 3 years ago
- This repository has been integrated in https://github.com/DeepRank/deeprank2☆145Updated last year
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆151Updated 4 years ago
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆89Updated 3 years ago
- source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molec…☆105Updated last week
- ATOM3D: tasks on molecules in three dimensions☆312Updated 2 years ago
- Exploring Evolution-aware & free protein language models as protein function predictors☆63Updated 11 months ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆83Updated 4 years ago
- Deep residual neural network for protein contact/distance prediction developed by Xu group☆79Updated 5 years ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆180Updated last year
- DiffLinker: Equivariant 3D-Conditional Diffusion Model for Molecular Linker Design☆352Updated last year
- Database of Interacting Protein Structures (DIPS)☆102Updated last year
- Official implementation of "Generating 3D Molecules for Target Protein Binding" [ICML2022 Long Presentation]☆109Updated 2 years ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated last year
- PyTorch library of layers acting on protein representations☆119Updated last year
- ☆202Updated last year