aqlaboratory / openfoldLinks
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
☆3,132Updated 3 weeks ago
Alternatives and similar repositories for openfold
Users that are interested in openfold are comparing it to the libraries listed below
Sorting:
- To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released☆1,621Updated 2 years ago
- This package contains deep learning models and related scripts for RoseTTAFold☆2,195Updated last year
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆3,817Updated last year
- Making Protein folding accessible to all!☆2,446Updated 3 weeks ago
- Code for running RFdiffusion☆2,467Updated last week
- Code for the ProteinMPNN paper☆1,469Updated last year
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,257Updated 4 months ago
- Listing of papers about machine learning for proteins.☆1,670Updated last year
- A trainable PyTorch reproduction of AlphaFold 3.☆1,341Updated last week
- OmegaFold Release Code☆598Updated 2 years ago
- Implementation of Alphafold 3 from Google Deepmind in Pytorch☆1,543Updated 3 weeks ago
- Optimizing AlphaFold Training and Inference on GPU Clusters☆611Updated last year
- List of papers about Proteins Design using Deep Learning☆1,787Updated last week
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,332Updated 5 months ago
- Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch☆793Updated 2 weeks ago
- Protein Graph Library☆1,134Updated this week
- ☆2,096Updated 2 weeks ago
- Official release of the ProGen models☆673Updated 2 years ago
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆641Updated 4 months ago
- ColabFold on your local PC☆767Updated 3 months ago
- Chai-1, SOTA model for biomolecular structure prediction☆1,787Updated last month
- A powerful and flexible machine learning platform for drug discovery☆1,541Updated last year
- Open source implementation of AlphaFold3☆1,010Updated last year
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,074Updated last month
- Diffusion models of protein structure; trigonometry and attention are all you need!☆554Updated last year
- Making Protein Design accessible to all via Google Colab!☆818Updated this week
- A generative model for programmable protein design☆762Updated last year
- ☆755Updated 4 months ago
- MMseqs2: ultra fast and sensitive search and clustering suite☆1,834Updated 2 weeks ago
- Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…☆719Updated 2 years ago