Alternatives and similar repositories for alphafold_singularity

Users that are interested in alphafold_singularity are comparing it to the libraries listed below

• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆48Updated 3 years ago
• normandavey / AlphaFold2-IDR-complex-prediction
  ☆39Updated 4 years ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 6 months ago
• prehensilecode / alphafold_singularity
  Singularity recipe for AlphaFold
  ☆36Updated 10 months ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆53Updated 11 months ago
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆60Updated 2 months ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆25Updated 2 weeks ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆23Updated 2 years ago
• proteinphysiologylab / frustratometeR
  ☆37Updated 3 months ago
• graik / biskit
  A Python platform for Structural Bioinformatics
  ☆57Updated 6 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 3 years ago
• GodzikLab / FATCAT-dist
  ☆17Updated 2 years ago
• idptools / sparrow
  Next generation sequence parameter library for proteins
  ☆35Updated 3 weeks ago
• UCLOrengoGroup / cath-alphaflow
  ☆23Updated 4 months ago
• maovshao / PLMAlign
  PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarity
  ☆20Updated last month
• romainstuder / evosite3d
  ☆21Updated last week
• PDB-REDO / AlphaBridge
  ☆43Updated 2 weeks ago
• Faezov / PDBrenum
  ☆30Updated 4 months ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆44Updated last year
• sarisabban / RosettaAbinitio
  A bash script for an automated Rosetta Abinitio folding simulation on an HPC
  ☆11Updated 5 years ago
• jurgjn / af-protein-universe
  Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…
  ☆27Updated 2 years ago
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆30Updated last year
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆34Updated last month
• PombertLab / 3DFI
  The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
  ☆20Updated last year
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆32Updated last week
• ProteinsWebTeam / interpro7-api
  ☆19Updated last week
• walterlab-HMS / SPOC
  Code repository for the SPOC tool for scoring binary AF-M predicitons.
  ☆13Updated 5 months ago