A flexible, pragmatic workflow tool.
☆35Apr 22, 2026Updated last month
Alternatives and similar repositories for gwf
Users that are interested in gwf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Barcoded Molecular Families☆22Nov 20, 2017Updated 8 years ago
- Julia module to handle PLINK BED files☆11Jul 10, 2018Updated 7 years ago
- a simple lightweight workflow engine for data analysis scripting☆11Sep 5, 2019Updated 6 years ago
- Program to run the SOWH test (likelihood-based test used to compare tree topologies which are not specified a priori)☆11May 3, 2024Updated 2 years ago
- Automated pipeline for running CoalHMM☆13Jan 9, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Northern Arizona SNP Pipeline☆20Oct 29, 2024Updated last year
- TIDDIT - structural variant calling☆10Dec 8, 2025Updated 5 months ago
- Basic, no assumptions, multi-pileup☆24Mar 26, 2014Updated 12 years ago
- Bandicoot is a programming system with a set-based programming language and a run-time environment.☆52Sep 24, 2015Updated 10 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Apr 25, 2023Updated 3 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Oct 11, 2018Updated 7 years ago
- A typed logic programming language embedded in Haskell☆50Mar 3, 2013Updated 13 years ago
- Stochastic simulation of next-generation sequencing data from neutrally evolving tumors☆10Nov 9, 2016Updated 9 years ago
- Liability Estimation for Case-Control Studies☆10Sep 26, 2020Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 10 months ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Oct 31, 2019Updated 6 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- The integrated pipeline for Indel detection☆17Apr 29, 2018Updated 8 years ago
- Grabbing genome accessions & download info based on taxonomy, using the NCBI REST API, w00t☆12Feb 23, 2025Updated last year
- SNP Pipeline is a pipeline for the production of SNP matrices from sequence data used in the phylogenetic analysis of pathogenic organism…☆66May 5, 2023Updated 3 years ago
- Reference-free duplex sequencing pipeline.☆19Oct 20, 2022Updated 3 years ago
- ☆10Aug 29, 2012Updated 13 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- an open-source pipeline for Affymetrix Axiom genotyping workflow on livestock species☆14Jul 22, 2016Updated 9 years ago
- ☆11Jun 17, 2023Updated 2 years ago
- Gene family evolution analysis of OneKP capstone paper☆13May 10, 2021Updated 5 years ago
- A multi-algorithmic framework for phylogenetic inference☆14Nov 28, 2025Updated 5 months ago
- Fast and generic implementation of the minhash algorithm☆14Jul 8, 2025Updated 10 months ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆21Sep 28, 2022Updated 3 years ago
- Load numpy arrays and HDF5 files from VCF (variant call format)☆32Jun 27, 2017Updated 8 years ago
- Simple tool to verticalize text delimited files.☆37May 6, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆51Oct 14, 2023Updated 2 years ago
- Study of TE evolution in a population of genomes☆10Dec 11, 2023Updated 2 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆12Updated this week
- BigWig and BAM utilities☆103Mar 26, 2024Updated 2 years ago
- Tool to easily start up an IPython cluster on different schedulers.☆147May 1, 2020Updated 6 years ago
- Pipeline for generate Ks plots of transcriptome data.☆12Dec 27, 2017Updated 8 years ago
- DPPDIV☆12Apr 10, 2020Updated 6 years ago