natalie11 / tUbeNetLinks
CNN for segmenting vasculature
☆14Updated this week
Alternatives and similar repositories for tUbeNet
Users that are interested in tUbeNet are comparing it to the libraries listed below
Sorting:
- ☆18Updated last year
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆51Updated last year
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆15Updated last year
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆74Updated 4 years ago
- 3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X☆35Updated last year
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆39Updated 5 years ago
- A synthesis pipeline for annotation-free blood vessel segmentation in cerebral 3D OCTA images. Paper accepted @ MICCAI24.☆25Updated last week
- The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use …☆29Updated 4 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 5 months ago
- Python Vascular Network Analysis☆26Updated last month
- ☆93Updated last month
- An open-source application for the analysis and visualization of segmented vasculature datasets☆119Updated last year
- Code for training and inference of a 3D CNN for whole-heart segmentation in CCTA☆12Updated 3 years ago
- The paper is under review, and the complete code will be public when the paper is accepted.☆12Updated 3 years ago
- Repository for Vesselness algorithms☆47Updated last year
- This is a joint project between Helmholtz Imaging (located at DKFZ) and Lin Yang and Otmar Schmid (Helmholtz Munich).☆10Updated 9 months ago
- Brain vessel segmentation using 3D convolutional neural networks☆43Updated 3 years ago
- Image analysis approaches to analyze the OAI magnetic resonance images☆26Updated 8 months ago
- Deep 3D Vessel Segmentation based on Cross Transformer Network☆20Updated 3 years ago
- Package to compute the evaluation metrics for MICCAI TopCoW2024 challenge☆14Updated 11 months ago
- Self-guided notebook tutorials to help get started with IDC☆36Updated this week
- VAN-GAN: Vessel Segmentation Generative Adversarial Network. A tool to segment 3D vascular networks without paired training data.☆22Updated 4 months ago
- Model Zoo for parameter settings in Elastix, ITKElastix and SimpleElastix☆51Updated 5 months ago
- ☆12Updated 4 years ago
- A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels…☆48Updated last year
- 3D Slicer modules for brain segmentation using deep learning.☆30Updated last year
- hybrid representation learning approach for fully automatic and template-free vessel centerline extraction☆11Updated 2 years ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆41Updated last year
- ☆15Updated 4 years ago
- Segmentation of blood vessel from CTA scan using bone subtraction and an iterative thresholding seeking algorithm☆11Updated 4 years ago