natalie11 / tUbeNetLinks
CNN for segmenting vasculature
☆14Updated last week
Alternatives and similar repositories for tUbeNet
Users that are interested in tUbeNet are comparing it to the libraries listed below
Sorting:
- ☆18Updated last year
- Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning☆72Updated 3 years ago
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆14Updated last year
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆47Updated last year
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆40Updated 5 years ago
- ☆77Updated last week
- A synthesis pipeline for annotation-free blood vessel segmentation in cerebral 3D OCTA images. Paper accepted @ MICCAI24.☆24Updated 2 months ago
- Python Vascular Network Analysis☆24Updated last year
- A foundation model for universal 3D blood vessel segmentation. Paper accepted @ CVPR25.☆81Updated 3 weeks ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration☆45Updated last week
- Segmentation and 3D Reconstruction of Microglia and Blood Vessel☆9Updated 7 years ago
- Repository for Vesselness algorithms☆47Updated last year
- Python package for deep learning based image to image transformation☆53Updated last year
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 3 months ago
- panoptica -- instance-wise evaluation of 3D semantic and instance segmentation maps☆25Updated 2 weeks ago
- The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use …☆28Updated 4 years ago
- VAN-GAN: Vessel Segmentation Generative Adversarial Network. A tool to segment 3D vascular networks without paired training data.☆20Updated 2 months ago
- ☆86Updated 3 weeks ago
- Multi-modal Image Registration And Connectivity anaLysis☆45Updated 2 weeks ago
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆48Updated 11 months ago
- 3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X☆35Updated last year
- SVoRT: Iterative Transformer for Slice-to-Volume Registration in Fetal Brain MRI☆42Updated 2 years ago
- Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"☆97Updated 3 months ago
- Baseline methods, training scripts, and pretrained models for LUMIR challenge at Learn2Reg 2024☆28Updated 2 weeks ago
- ☆28Updated last year
- An open-source application for the analysis and visualization of segmented vasculature datasets☆115Updated last year
- A library for performing image registration using deep learning, regularized by inverse consistency☆46Updated this week
- Script that registers Histology slices to volumetric image data☆11Updated last year
- Affine medical image registration using deep learning☆19Updated 2 years ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆40Updated 2 weeks ago