Proof of concept code from Gretel.ai and Illumina using generative neural networks to create synthetic versions of mouse genotype and phenotype data.
☆33Jan 19, 2022Updated 4 years ago
Alternatives and similar repositories for synthetic-data-genomics
Users that are interested in synthetic-data-genomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Public blueprints for data use cases☆85Sep 10, 2025Updated 9 months ago
- 📖 A curated list of resources dedicated to synthetic data☆142Jul 29, 2022Updated 3 years ago
- A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.☆19Dec 21, 2025Updated 6 months ago
- Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element☆11Sep 21, 2020Updated 5 years ago
- Synthetic data generators for structured and unstructured text, featuring differentially private learning.☆681Jun 24, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Python script for calling SNPs, MNPs, and indels in mitochondrial DNA.☆10Apr 19, 2016Updated 10 years ago
- A utility for splitting mixed origin NGS reads☆10Jun 1, 2021Updated 5 years ago
- Fast python code to merge paired-end reads☆13Oct 29, 2021Updated 4 years ago
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Apr 28, 2026Updated 2 months ago
- A curated list of awesome resources, papers, datasets, and tools related to Genomic LLMs. This repository aims to provide a comprehensive…☆18Aug 7, 2024Updated last year
- ☆11May 26, 2023Updated 3 years ago
- ☆17Feb 27, 2026Updated 4 months ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Nov 11, 2019Updated 6 years ago
- Effect of tokenization on transformers for biological sequence☆23Dec 31, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- iLASH - IBD Estimation Using Locality Sensitive Hashing☆18Nov 6, 2025Updated 8 months ago
- ☆16Jun 5, 2022Updated 4 years ago
- Python toolbox for multi-omics data mapping and analysis☆28Apr 13, 2023Updated 3 years ago
- This is the repository for the single-cell transcriptomics application of the Deep Generative Decoder (DGD), developed by the Krogh group…☆15Aug 8, 2024Updated last year
- density growing clustering☆10Dec 2, 2021Updated 4 years ago
- MaveDB API☆17Jun 30, 2026Updated last week
- Software program for generating synthetic datasets for genotypes and phenotypes☆21Jun 1, 2023Updated 3 years ago
- Differential Privacy Protection against MembershipInference Attack on Machine Learning for Genomic Data☆19Aug 4, 2020Updated 5 years ago
- ☆12Aug 3, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Se…☆22Jul 3, 2026Updated last week
- A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification o…☆17Jun 29, 2026Updated last week
- Code used for mouse single cell RNAseq testis atlas☆12Nov 28, 2020Updated 5 years ago
- Julia utilities for handling VCF files☆19Apr 2, 2024Updated 2 years ago
- The EMP Jammer is an innovative jamming device which jams the devices nearby by inducing an alternating voltage in it .☆13Jan 3, 2023Updated 3 years ago
- 🍊🔬 Bioinformatics add-on for Orange3☆24Jun 22, 2026Updated 2 weeks ago
- PyTorch Implementation of GPT-2☆34Sep 4, 2024Updated last year
- A Rmarkdown to SoS Notebook converter☆11Mar 26, 2026Updated 3 months ago
- MCP Server for creating/editing recipes in Paprika 3 with natural language☆30Dec 28, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.☆45May 22, 2026Updated last month
- ☆17Jan 9, 2025Updated last year
- Reconstruction of spatial context of gene expression with optimal transport☆11Mar 14, 2019Updated 7 years ago
- R package to explore active transposable elements with RNA-seq data☆21Nov 25, 2022Updated 3 years ago
- 🌳 WALD Stack Demo 🏎️☆33Sep 18, 2024Updated last year
- Instantiate objects and call functions using dictionary configs in Python using Genos.☆10Jun 19, 2023Updated 3 years ago
- ☆19Jun 24, 2025Updated last year