Alternatives and similar repositories for beacon2-ri-api

Users that are interested in beacon2-ri-api are comparing it to the libraries listed below

• CNAG-Biomedical-Informatics / convert-pheno
  A software toolkit for the interconversion of standard data models for phenotypic data
  ☆15Updated 2 weeks ago
• OHDSI / Genomic-CDM
  Repository for development of the genomic module of the CDM.
  ☆23Updated 6 years ago
• vidboda / MobiDetails
  WebApp for DNA variants interpretation
  ☆14Updated last week
• rsemeraro / XomeBlender
  Generates synthetic cancer genomes with different contamination level and intra-tumor heterogeneity and devoid of any synthetic element
  ☆11Updated 5 years ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 3 years ago
• WGLab / EHR-Phenolyzer
  A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list
  ☆37Updated 2 years ago
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆71Updated last month
• ga4gh-beacon / beacon-v2
  Unified repository for the GA4GH Beacon v2 API standard
  ☆32Updated last week
• lifebit-ai / GATK
  Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices
  ☆11Updated 5 years ago
• ga4gh-beacon / beacon-elixir
  Elixir Beacon Reference Implementation. Latest release is compliant with v1.1.0 of the specification.
  ☆14Updated 5 years ago
• lgautier / fastq-and-furious
  Efficient handling of FASTQ files from Python
  ☆51Updated last week
• nmdp-bioinformatics / flow
  Consensus assembly and variant calling workflow.
  ☆12Updated 10 years ago
• phenopolis / phenopolis
  An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data
  ☆33Updated 3 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆42Updated 2 years ago
• griffithlab / civic-meeting
  Repo for advertising and organizing CIViC unconference/meeting activities
  ☆10Updated 4 months ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆47Updated last month
• smithijk / vcf_fdw_postgresql
  A PostgreSQL foreign data wrapper for VCF files.
  ☆18Updated 8 years ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆86Updated last month
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated 9 months ago
• biocommons / uta
  Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…
  ☆71Updated last month
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆61Updated last week
• gawbul / pyEnsemblRest
  A client for the Ensembl REST API written in the Python programming language
  ☆27Updated this week
• gatk-workflows / gatk4-jupyter-notebook-tutorials
  This repository contains Jupyter Notebooks containing GATK Best Practices Workflows
  ☆26Updated 5 years ago
• iobio / bam.iobio.io
  http://bam.iobio.io
  ☆47Updated last year
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆35Updated 6 months ago
• madprime / genevieve
  Genevieve genome report tool
  ☆14Updated 3 years ago
• aws-quickstart / quickstart-illumina-dragen
  AWS Quick Start Team
  ☆24Updated last year
• ucsd-ccbb / VAPr
  VAPr: A Python package for NoSQL variant data storage, annotation and prioritization
  ☆37Updated 4 years ago
• ga4gh-discovery / data-connect
  Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.
  ☆24Updated 2 years ago