awslabs / guidance-for-multi-omics-and-multi-modal-data-integration-and-analysis-on-awsView on GitHub
This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale analysis and perform interactive queries against a data lake. The solution also demonstrates the use of Amazon Omics for multi-modal analysis.
☆25Jun 30, 2025Updated last year
Alternatives and similar repositories for guidance-for-multi-omics-and-multi-modal-data-integration-and-analysis-on-aws
Users that are interested in guidance-for-multi-omics-and-multi-modal-data-integration-and-analysis-on-aws are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The Genomics Tertiary Analysis and Machine Learning Using Amazon SageMaker solution creates a scalable environment in AWS to develop mach…☆11Jul 7, 2023Updated 3 years ago
- ☆11Feb 16, 2021Updated 5 years ago
- Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use…☆11Apr 12, 2024Updated 2 years ago
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…☆14Oct 22, 2025Updated 10 months ago
- This solution provides a framework for Next Generation Sequencing (NGS) genomics secondary-analysis pipelines using AWS Step Functions an…☆40Jan 11, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Genomics Workflows on AWS☆148Jul 31, 2023Updated 3 years ago
- ☆12Nov 1, 2022Updated 3 years ago
- ☆15Jan 16, 2018Updated 8 years ago
- ☆17Apr 29, 2026Updated 4 months ago
- An example of bioinformatics and bigdata tools can playing nicely together☆14May 17, 2016Updated 10 years ago
- Ontology mapping for Open Targets☆23Updated this week
- Training material for the GWAS Catalog REST API workshop☆13Aug 13, 2026Updated 3 weeks ago
- Extends miniwdl to run workflows on AWS Batch & EFS☆22Feb 5, 2024Updated 2 years ago
- ☆12Sep 27, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Analysis and figure generation code for the ABRF NGS Phase II Study on DNA-seq reproducibility☆18Aug 5, 2021Updated 5 years ago
- Lollipop-diagram to visualize genomic mutations☆20Sep 3, 2019Updated 7 years ago
- ☆19Dec 2, 2025Updated 9 months ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19Jul 19, 2026Updated last month
- ☆93Jul 23, 2026Updated last month
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- A public catalog of Benchling App examples written in Python.☆18Jul 21, 2026Updated last month
- Amazon EMR Notebook to show how to read from and write to Delta tables with Amazon EMR☆17Jul 28, 2026Updated last month
- ☆22Apr 27, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Gene expression viewer template☆12Aug 30, 2017Updated 9 years ago
- Repository with information about the BioHackathon hosted in Paris in Nov 2018☆28Jul 6, 2021Updated 5 years ago
- The Cancer bioMarker Prediction Pipeline (CAMPP)☆19Oct 25, 2020Updated 5 years ago
- Chromax is a breeding simulator based on JAX.☆10Jun 6, 2025Updated last year
- Trigger CWL workflows via GA4GH WES and TES☆18Jul 22, 2026Updated last month
- ☆10Apr 11, 2022Updated 4 years ago
- Workflow Execution Service Backend☆21Sep 1, 2026Updated last week
- AlphaFind: Discover structure similarity across the entire known proteome☆27Apr 14, 2026Updated 4 months ago
- Exposing public genomics data via computable and searchable metadata☆13Jul 9, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Jan 24, 2020Updated 6 years ago
- Pipeline to annotate sequences at different taxonomic levels using NCBI's taxonomy☆19Jul 19, 2013Updated 13 years ago
- Foam low-code for coders app development framework☆19Jun 5, 2024Updated 2 years ago
- Proteomics Mass Spectrometry Datasets for Machine Learning☆22Aug 16, 2024Updated 2 years ago
- ☆18Nov 15, 2021Updated 4 years ago
- ☆10Dec 29, 2021Updated 4 years ago
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago