grandrea / Alphafold-analysis
scripts to visualise results of alphafold2 and 3 multimer runs
☆17Updated 11 months ago
Alternatives and similar repositories for Alphafold-analysis:
Users that are interested in Alphafold-analysis are comparing it to the libraries listed below
- ☆49Updated last month
- ☆81Updated 7 months ago
- PyDock Tutorial☆31Updated 6 years ago
- Analysis of alphafold and colabfold results☆27Updated 3 weeks ago
- Small_molecule_binder_design_use_pseudocycles☆18Updated 5 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated 11 months ago
- Set of Python scripts designed to be a dependency-free cross-platform swiss army knife for PDB files.☆26Updated 2 years ago
- ☆39Updated last year
- Explicit crosslinks in AlphaFold 3☆21Updated last month
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆56Updated last year
- ☆76Updated last month
- ☆43Updated 7 months ago
- Modelling of Large Protein Complexes☆37Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆50Updated 5 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆66Updated 8 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆38Updated 5 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated last month
- ☆26Updated last week
- Kuhlman Lab Installation of AlphaFold3☆25Updated last month
- Set of useful HADDOCK utility scripts☆51Updated 8 months ago
- Making Protein folding accessible to all!☆22Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- A domain parser for Alphafold models☆35Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆29Updated 10 months ago
- AlphaFold-initiated replica exchange protein docking☆79Updated last month
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆49Updated last month
- ☆31Updated last year
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago