Alternatives and similar repositories for AlphafoldInstallation

Users that are interested in AlphafoldInstallation are comparing it to the libraries listed below

• ai4protein / Pro-Prime
  ☆70Updated last week
• PKUGaoGroup / DSDP
  Deep Site and Docking Pose (DSDP) is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, …
  ☆63Updated 2 months ago
• ai4protein / VenusFactory
  🏭 Easy data acquisition, benchmark resources, PLM fine-tuning for bio-researchers. (ACL Demo 2025)
  ☆146Updated this week
• CharlesHahn / DuIvyTools
  A Tool to process and visualize the results of molecular dynamics simulations(GROMACS).
  ☆82Updated last year
• Wang-Lin-boop / CADD-Scripts
  Scripts for virtual screening, cross docking and protein relax using Schrödinegr and Rosetta
  ☆80Updated 4 months ago
• bytedance / Protenix-Dock
  An accurate and trainable end-to-end protein-ligand docking framework
  ☆105Updated 5 months ago
• guyujun / FunclibLocal
  Rosetta Funclib
  ☆22Updated 5 years ago
• OdinZhang / Delete
  A universal structure-directed lead optimization
  ☆49Updated 5 months ago
• carbonsilicon-ai / CarsiDock
  Official repo of "CarsiDock: a deep learning paradigm for accurate protein–ligand docking and screening based on large-scale pre-training…
  ☆96Updated 3 weeks ago
• schrojunzhang / KarmaDock
  ☆123Updated last year
• ComputArtCMCG / PLANET
  ☆68Updated last year
• pengxingang / PocketXMol
  Implementation of PocketXMol, the pocket-interacting molecular generative foundation model.
  ☆73Updated 2 weeks ago
• guyujun / pyrosetta-basic
  ☆172Updated 3 years ago
• sc8668 / RTMScore
  ☆105Updated 2 years ago
• Valdes-Tresanco-MS / AutoDockTools_py3
  Python3 translation of AutoDockTools
  ☆127Updated last year
• luancarvalhomartins / PyAutoFEP
  PyAutoFEP: an automated FEP workflow for GROMACS integrating enhanced sampling methods
  ☆190Updated last year
• ikalvet / heme_binder_diffusion
  ☆138Updated last month
• SIAT-code / ProtChat
  ☆11Updated 9 months ago
• DeltaGroupNJUPT / Vina-GPU-2.0
  Vina-GPU 2.0 accelerates AutoDock Vina and its related commonly derived docking methods, such as QuickVina 2 and QuickVina-W with GPUs.
  ☆109Updated last year
• ai4protein / VenusFSFP
  VenusFSFP: Few-Shot Protein Fitness Prediction
  ☆92Updated 2 weeks ago
• CharlesHahn / DuIvy
  some scripts for analysis of MD and CADD. And some tutorials.
  ☆58Updated last year
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆110Updated 10 months ago
• guaguabujianle / EHIGN_PLA
  ☆22Updated last year
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆263Updated last year
• RosettaCommons / RFdiffusion2
  ☆242Updated 2 weeks ago
• briandasantini / cPEPmatch
  Tool to design cyclic peptides that mimic proteins and target their binding partners.
  ☆15Updated last year
• ELELAB / RosettaDDGPrediction
  ☆75Updated 6 months ago
• CAODH / EquiScore
  ☆77Updated last year
• katritchlab / V-SYNTHES
  ☆77Updated 3 years ago
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆67Updated 3 months ago