☆13May 18, 2025Updated last year
Alternatives and similar repositories for AMPGen
Users that are interested in AMPGen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆14Jul 8, 2025Updated 10 months ago
- ☆13Apr 1, 2026Updated last month
- PairMap: An Intermediate Insertion Approach for Improving the Accuracy of Relative Free Energy Perturbation Calculations for Distant Comp…☆16Mar 18, 2026Updated 2 months ago
- PyChem-Pro: a molecular viewer☆110May 11, 2026Updated last week
- Merging, linking and placing compounds by stitching bound compounds together like a reanimated corpse☆12Feb 22, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Jun 24, 2024Updated last year
- Research repository to the publication: Navigating the Design Space of Equivariant Diffusion-Based Generative Models for De Novo 3D Molec…☆14Apr 2, 2024Updated 2 years ago
- EC-Conf: An Ultra-fast Diffusion Model for Molecular conformation Generation with Equivariant Consistency☆12Mar 28, 2024Updated 2 years ago
- DrugGen: Advancing Drug Discovery with Large Language Models and Reinforcement Learning Feedback☆21May 22, 2025Updated 11 months ago
- ☆15May 29, 2024Updated last year
- Transformer-based molecular generative model for antiviral drug design☆17Nov 20, 2024Updated last year
- Structure-based drug design based on Retrieval Augmented Generation☆27Nov 7, 2025Updated 6 months ago
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆23Mar 19, 2025Updated last year
- Antibody structure prediction☆37Dec 16, 2025Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆23Oct 31, 2025Updated 6 months ago
- ☆34Dec 11, 2025Updated 5 months ago
- Weighted Ensemble Data Analysis and Plotting☆27Dec 11, 2025Updated 5 months ago
- ☆30Jan 21, 2024Updated 2 years ago
- This is the GitHub repository accompanying Krishnan, Anahtar, Valeri, et al., 2025☆37Jun 8, 2025Updated 11 months ago
- A Light-Weight And Interpretable Molecular Docking Model☆26Oct 23, 2024Updated last year
- Free Parametrization for Small Molecules☆53Updated this week
- ☆32Aug 28, 2025Updated 8 months ago
- Official implementation of SketchMol.☆33Feb 14, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Features Based Conformational Clustering of MD trajectories. See details at:☆10Nov 20, 2025Updated 5 months ago
- List of papers about Peptide research using Deep Learning☆40Feb 27, 2026Updated 2 months ago
- ☆11May 22, 2024Updated last year
- Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab☆11Oct 16, 2022Updated 3 years ago
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆34Aug 23, 2024Updated last year
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- Disordered protein ensemble prediction☆14Apr 2, 2026Updated last month
- ☆13Mar 28, 2025Updated last year
- ☆13Dec 5, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Cloud-based Drug Binding Structure Prediction☆47Feb 9, 2026Updated 3 months ago
- ☆55Mar 12, 2026Updated 2 months ago
- ☆11Jun 16, 2024Updated last year
- Open Source, Prepare a molecular dynamic simulation from scratch without installing local VMD, use LigParGen for topology, it is one of t…☆13Jul 3, 2023Updated 2 years ago
- A tutorial for Streamlined Alchemical Free Energy Perturbations with NAMD☆16Apr 3, 2026Updated last month
- ☆15Oct 5, 2024Updated last year
- POLYGON VAE For de novo Polypharmacology☆42Mar 5, 2025Updated last year