Python package for handling IHM mmCIF and BinaryCIF files
β18Jun 5, 2026Updated this week
Alternatives and similar repositories for python-ihm
Users that are interested in python-ihm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π mmCIF support for hybrid/integrative modelsβ26May 4, 2026Updated last month
- Python package for handling ModelCIF mmCIF and BinaryCIF filesβ14Updated this week
- mmCIF Core Access Libraryβ50Updated this week
- A Rust library for calculating the SASA for a protein. 5x faster than Freesasa. Based on the Shrake & Rupley algorithm.β20Jun 3, 2026Updated last week
- Real-time structure motif searching in protein 3D structures using an inverted index strategyβ15Jul 19, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Java library for handling text and BinaryCIF files.β13Jan 13, 2026Updated 4 months ago
- β29Apr 30, 2026Updated last month
- An open-source library for the analysis of protein interactions.β35Dec 5, 2021Updated 4 years ago
- Compute protein contact map from PDB file.β12May 23, 2017Updated 9 years ago
- mmCIF-based extension dictionary for computed structure modelsβ24Feb 5, 2026Updated 4 months ago
- Global analysis platform for fluorescence dataβ12May 4, 2026Updated last month
- Some shell scripts related to Thermo Fisher raw format conversion using msconvertβ15Feb 10, 2026Updated 4 months ago
- Benchmarks for Primitive Collectionsβ13Apr 4, 2023Updated 3 years ago
- XiSearchβ17May 6, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The Integrative Modeling Platformβ81May 28, 2026Updated last week
- A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"β38Oct 30, 2023Updated 2 years ago
- Najmanovich Research Group Toolkit for Elastic Networksβ13Apr 5, 2023Updated 3 years ago
- π Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure dataβ¦β11Oct 16, 2018Updated 7 years ago
- Protein-Protein Docking using Genetic Algorithmβ20Updated this week
- β13Mar 16, 2024Updated 2 years ago
- Contact-based protein structure predictionβ10Feb 12, 2019Updated 7 years ago
- Direct coupling analysis software for protein and RNA sequencesβ61Jul 21, 2025Updated 10 months ago
- scripts to visualise results of alphafold2 and 3 multimer runsβ18May 28, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting β’ AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- SiNGA (Simulation of Natural Systems using Graph Automata) is an open-source library containing tools especially for structural bioinforβ¦β11Aug 26, 2025Updated 9 months ago
- Examples showing how to use SWIG to wrap MATLAB Coder generated C and C++ code for other languagesβ11Apr 10, 2023Updated 3 years ago
- A Rust implementation of the LightDock macromolecular docking softwareβ30Apr 19, 2024Updated 2 years ago
- material for cheminfo tutorialβ13Oct 26, 2023Updated 2 years ago
- Implementation of "Accurate classification of protein subcellular localization from high throughput microscopy images using deep learningβ¦β13Oct 19, 2022Updated 3 years ago
- Manipulate and mine Relion .star filesβ20Nov 25, 2024Updated last year
- Rigid body fitting of atomic strucures in cryo-electron microscopy density mapsβ24May 20, 2026Updated 2 weeks ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural informationβ33Jan 22, 2026Updated 4 months ago
- A deep neural network for kernel-blind image deblurringβ10Oct 8, 2019Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Machine learning experiments for CheckMyBlobβ14Jun 14, 2018Updated 7 years ago
- MS-cleavable search engine that enables interactomic analysis by identifying tandem mass spectra of cross-linked peptides.β26May 23, 2026Updated 2 weeks ago
- Feature-aware Directed OrtholoG searchβ14Updated this week
- This is a generic C++ library that can be used to rapidly align two small molecules in 3D space, with shape - and optionally color - Taniβ¦β17Sep 3, 2025Updated 9 months ago
- Protein structure descriptors and alignment based on 3D Zernike moments.β40Apr 10, 2026Updated last month
- New version of the Pandas + Jupyter workshopβ12Jul 6, 2023Updated 2 years ago
- Create macromolecular imagesβ33Apr 7, 2025Updated last year