ihmwg / python-ihmLinks
Python package for handling IHM mmCIF and BinaryCIF files
☆18Updated 3 weeks ago
Alternatives and similar repositories for python-ihm
Users that are interested in python-ihm are comparing it to the libraries listed below
Sorting:
- 📖 mmCIF support for hybrid/integrative models☆24Updated 7 months ago
- FreeSASA Python Module☆58Updated 5 months ago
- ☆80Updated 2 months ago
- Protein and nucleic acid validation service☆93Updated last year
- mmCIF Core Access Library☆49Updated last week
- Modeling with limited data☆60Updated 3 weeks ago
- A simple Python library to generate model peptides☆91Updated 5 years ago
- Calculation of interatomic interactions in molecular structures☆117Updated last year
- Python interface for the RCSB PDB search API.☆65Updated 9 months ago
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆135Updated 2 years ago
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆146Updated 11 months ago
- C-library for calculating Solvent Accessible Surface Areas☆171Updated last month
- A lightweight pure python package for reading, writing and manipulating mmCIF files distributed by the wwPDB"☆38Updated 2 years ago
- Software for biomolecular electrostatics and solvation calculations☆121Updated last year
- The MinHashed Atom Pair fingerprint of radius 2☆119Updated 2 years ago
- Calculation of interatomic interactions in molecular structures☆83Updated 4 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆97Updated 7 months ago
- Reduce - tool for adding and correcting hydrogens in PDB files☆161Updated this week
- Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes☆157Updated last month
- View proteins and trajectories in the terminal☆113Updated 5 years ago
- A python toolkit for analysing membrane protein-lipid interactions.☆68Updated 2 months ago
- A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dicti…☆74Updated 2 months ago
- PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.☆163Updated last month
- Python interface for RCSB.org API services☆55Updated last month
- Toolkit for free-energy calculation setup/analysis and biomolecular structure handling☆67Updated 4 years ago
- Library containing code to manipulate mmCIF and PDB files☆38Updated this week
- HDXer is a package to compute Hydrogen-Deuterium exchange data from biomolecular simulations, compare to experiment, and perform ensemble…☆19Updated 2 years ago
- A Python library for structural cheminformatics☆103Updated last month
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- Create DSSP and HSSP files☆94Updated last year