zw2x / glinter
Graph Learning of INTER-protein contacts
☆9Updated 3 years ago
Alternatives and similar repositories for glinter:
Users that are interested in glinter are comparing it to the libraries listed below
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆12Updated last month
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆12Updated last year
- software used in paper "Antibody interface prediction with 3D Zernike descriptors and SVM"☆12Updated 4 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- ML toolset for creating TED: The Encyclopedia of Domains☆16Updated last week
- ☆26Updated 7 months ago
- ☆8Updated last year
- ☆13Updated 3 years ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆33Updated 10 months ago
- a fast and accurate physical energy function extended from EvoEF for protein sequence design☆25Updated last year
- Some scripts that I keep using over and over.☆18Updated 3 months ago
- A 3D-equivariant neural network for protein structure accuracy estimation☆18Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated 11 months ago
- DISTEVAL: A web-server for evaluating protein inter-residue distances☆18Updated 3 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆16Updated last year
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆13Updated 2 years ago
- [Bioinformatics 2022] Cross-Modality and Self-Supervised Protein Embedding for Compound-Protein Affinity and Contact Prediction☆14Updated 9 months ago
- De novo design of small molecule binding sites into proteins☆13Updated 3 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆36Updated 5 months ago
- ☆19Updated last year
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21Updated 5 years ago
- ☆17Updated last year
- ☆27Updated 2 years ago
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 3 years ago
- Deep ResNet-based protein contact prediction☆19Updated 5 years ago
- ☆14Updated 10 months ago
- Machine learning prediction of enzyme optimum pH☆29Updated 2 weeks ago
- ☆13Updated 3 months ago
- The code for NeurIPS 2023 paper DSR☆11Updated last year
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 3 years ago