gosling-lang / gosling.js

Related projects ⓘ

Alternatives and complementary repositories for gosling.js

• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆217Updated this week
• g2nb / igv-jupyter
  Extension for Jupyter which integrates igv.js
  ☆154Updated last year
• statgen / locuszoom
  A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
  ☆155Updated last year
• GoekeLab / bioinformatics-workflows
  minimal example implementations for bioinformatics workflow managers
  ☆261Updated 3 years ago
• higlass / higlass
  Fast, flexible and extensible genome browser.
  ☆311Updated 5 months ago
• GangCaoLab / CoolBox
  Jupyter notebook based genomic data visualization toolkit.
  ☆227Updated 3 months ago
• dpryan79 / MethylDackel
  A (mostly) universal methylation extractor for BS-seq experiments.
  ☆162Updated 4 months ago
• linsalrob / fastq-pair
  Match up paired end fastq files quickly and efficiently.
  ☆140Updated 5 months ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆187Updated 8 months ago
• vgteam / sequenceTubeMap
  displays multiple genomic sequences in the form of a tube map
  ☆182Updated last month
• nf-core / viralrecon
  Assembly and intrahost/low-frequency variant calling for viral samples
  ☆122Updated this week
• fulcrumgenomics / fqgrep
  Grep for FASTQ files
  ☆93Updated last month
• brentp / jigv
  igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"
  ☆122Updated last year
• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆67Updated last month
• snakemake-workflows / docs
  Documentation of the Snakemake-Workflows project
  ☆152Updated 2 years ago
• YaCui / Biocircos.js
  BioCircos.js - interactive circos for biological data
  ☆24Updated last year
• SciLifeLab / NGI-RNAseq
  Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.
  ☆51Updated 6 years ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆227Updated 5 months ago
• lgmgeo / AnnotSV
  Annotation and Ranking of Structural Variation
  ☆217Updated 2 months ago
• nf-core / fetchngs
  Pipeline to fetch metadata and raw FastQ files from public databases
  ☆151Updated this week
• nf-core / hic
  Analysis of Chromosome Conformation Capture data (Hi-C)
  ☆90Updated 3 weeks ago
• htseq / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆92Updated last month
• enasequence / enaBrowserTools
  A collection of scripts to assist in the retrieval of data from the ENA Browser
  ☆73Updated 7 months ago
• broadinstitute / long-read-pipelines
  Long read production pipelines
  ☆141Updated this week
• TickingClock1992 / RIdeogram
  ☆162Updated 4 years ago
• Ensembl / VEP_plugins
  Plugins for the Ensembl Variant Effect Predictor (VEP)
  ☆141Updated this week
• CRG-CNAG / CalliNGS-NF
  GATK RNA-Seq Variant Calling in Nextflow
  ☆132Updated last year
• waldronlab / curatedMetagenomicData
  Curated Metagenomic Data of the Human Microbiome
  ☆126Updated last week
• broadinstitute / viral-ngs
  Viral genomics analysis pipelines
  ☆190Updated last month
• lh3 / readfq
  Fast multi-line FASTA/Q reader in several programming languages
  ☆173Updated 3 years ago