gerstung-lab / AML-multistageLinks
Code accompanying Precision oncology for acute myeloid leukemia using a knowledge bank approach
☆28Updated 6 years ago
Alternatives and similar repositories for AML-multistage
Users that are interested in AML-multistage are comparing it to the libraries listed below
Sorting:
- ☆48Updated 2 years ago
- Explore and download data from the recount3 project☆35Updated 3 weeks ago
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆66Updated 7 years ago
- DRUGZ software☆23Updated 3 years ago
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- R Shiny application for cross omics data analysis. In revision with Bioinformatics Adv.☆30Updated last month
- Comprehensive survival analyses on the TCGA data.☆17Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 6 years ago
- ☆61Updated 4 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- Deep neural networks for predicting CpG methylation☆37Updated 8 years ago
- Zhang, et al, Nature Immunology, 2019. Use single-cell transcriptomics and proteomics to study autoimmune diseases.☆20Updated 2 months ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆74Updated 3 weeks ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆32Updated 2 months ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- 3D hotspot mutation proximity analysis tool☆47Updated 2 years ago
- Python API for Xena Hub☆52Updated 2 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- epigenome analysis to rank transcription factors☆30Updated 2 years ago
- REVOLVER - Repeated Evolution in Cancer☆65Updated 2 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated last year
- An R client for broads firehose pipeline, providing TCGA data sets☆60Updated 5 years ago
- Using BCR and expression for sequence embedding☆22Updated last week
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆33Updated 7 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆48Updated 3 weeks ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆45Updated last year