ENCODE-DCC / encode-data-usage-examplesLinks
☆10Updated 5 years ago
Alternatives and similar repositories for encode-data-usage-examples
Users that are interested in encode-data-usage-examples are comparing it to the libraries listed below
Sorting:
- ☆51Updated 3 weeks ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆68Updated this week
- Python interface to running command-line and web-based MHC binding predictors☆98Updated 10 months ago
- ☆49Updated 3 years ago
- Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)☆85Updated 3 years ago
- Grouping of Lymphocyte Interactions by Paratope Hotspots☆95Updated 4 years ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- ☆157Updated last week
- [Deprecated, see https://github.com/antigenomics/mirpy and other tools @antigenomics] Post-analysis of immune repertoire sequencing data☆141Updated last year
- ☆18Updated 9 years ago
- Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning☆63Updated 3 weeks ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- Python for Bioinformatics consist of a variety of python programmes,frequently used by bioinformaticians while handling biological data e…☆43Updated last year
- ☆41Updated this week
- Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.☆111Updated 11 months ago
- Compute generation probabilities of CDR3 amino acid and nucleotide sequences☆57Updated 4 years ago
- bioinformatics plotting and tools☆59Updated last year
- A collection of useful functions for bioinformatics data analysis☆24Updated last month
- What you need to process the Quarterly DepMap-Omics releases from Terra☆120Updated 2 weeks ago
- CLUMPS adapted to post-translational modifications.☆10Updated 3 months ago
- 🗂️ [vdjdb.cdr3.net is up and running] Git-based TCR database storage & management. Submissions welcome!☆140Updated this week
- DIABLO - an integrative multi-group, multi-dataset classification method☆25Updated 6 years ago
- Immunoglobulin and T-Cell receptor rearrangement software☆49Updated last year
- ☆57Updated 3 years ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆48Updated 2 years ago
- ☆38Updated 2 years ago
- some resources for startup companies☆54Updated last year
- Machine Learning in Medical Bioinformatics☆24Updated 4 months ago
- coding exercise using TCGA immune infiltration data☆45Updated last year
- ☆83Updated 8 months ago