Reference server implementation for the GA4GH HTSget API standard.
☆12Apr 8, 2026Updated 3 months ago
Alternatives and similar repositories for htsget-refserver
Users that are interested in htsget-refserver are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Apr 2, 2025Updated last year
- Beacon v2 Reference Implementation (API)☆17Dec 13, 2024Updated last year
- TASC aids the harmonisation of aspects of GA4GH's various products that would otherwise prevent different products from being used togeth…☆12Jul 9, 2026Updated 2 weeks ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- Your everyday SSH secured serial access☆19Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- High-level API for storing and querying sequence variant data☆20May 24, 2019Updated 7 years ago
- Command-line interface to SysV semaphores and message queues☆15Nov 20, 2020Updated 5 years ago
- Lossless VCF compression☆22Mar 4, 2022Updated 4 years ago
- Source codes for the book "Ansible For VMware by Examples" by Luca Berton☆12Dec 23, 2022Updated 3 years ago
- A server implementation of the htsget protocol for bioinformatics in Rust☆50Updated this week
- Backend for storing squads created with (Yet Another) X-Wing Squad Builder.☆11Jan 18, 2023Updated 3 years ago
- ☆11Apr 3, 2016Updated 10 years ago
- CIS Benchmark for Centos 7 (using Saltstack Configuration Management Platform)☆11Dec 16, 2020Updated 5 years ago
- Nanopore plasmid pipeline (FAST5 basecalling, assembly, plasmid identification and antimicrobial resistance genes identification).☆13Apr 20, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- ☆13Feb 12, 2022Updated 4 years ago
- Work supporting the comparison of SnpEff and VEP effect prediction and HGVS identifiers☆11Mar 15, 2017Updated 9 years ago
- SAPLING: Suffix Array Piecewise Linear INdex for Genomics☆25Sep 1, 2020Updated 5 years ago
- A command-line tool for executing, managing, and querying WDL workflows on Cromwell servers.☆14Aug 17, 2018Updated 7 years ago
- The WES API is a standard way to run and manage portable workflows.☆93Jun 11, 2026Updated last month
- A Python package for simply downloading publicly available web-hosted geo-spatial data. View API docs at: https://niwa.github.io/geoapis/☆10Sep 3, 2024Updated last year
- ☆10Dec 10, 2020Updated 5 years ago
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A repository for the schemas used for the Data Repository Service.☆63Jun 10, 2026Updated last month
- a repo to store community submitted connection templates for rConfig☆32Updated this week
- Simple CLI for ChatGPT using node.js☆17Jul 28, 2023Updated 2 years ago
- an open-source pipeline for Affymetrix Axiom genotyping workflow on livestock species☆14Jul 22, 2016Updated 10 years ago
- Repository with all my container recipes 👩🍳☆17Sep 9, 2024Updated last year
- A collection of command line tools for working with sequencing data☆52Updated this week
- Analysis of Ebola virus genomes☆17May 18, 2015Updated 11 years ago
- Fast, parallelized implementation of Principal Component Analysis with constant memory consumption for large data sets.☆12Feb 18, 2022Updated 4 years ago
- ☆15Nov 22, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Load genomic BAM files using Apache Spark☆21Jun 17, 2018Updated 8 years ago
- ☆17Oct 17, 2024Updated last year
- FUSE filesystem for the DNAnexus storage system☆13Apr 24, 2026Updated 3 months ago
- Simple matching of HTS samples based on HLA typing☆14Jan 4, 2017Updated 9 years ago
- Communication library for Rover 14CUX engine management diagnostics☆16Feb 20, 2026Updated 5 months ago
- Tool that converts between BioC XML files and BioC JSON files☆19Jan 10, 2017Updated 9 years ago
- ☆17Jan 5, 2021Updated 5 years ago