Alternatives and similar repositories for fasp-scripts

Users that are interested in fasp-scripts are comparing it to the libraries listed below

• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆67Updated 2 months ago
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆60Updated 2 months ago
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• broadinstitute / seqr-loading-pipelines
  hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
  ☆23Updated last week
• Molmed / checkQC
  CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria
  ☆29Updated 2 months ago
• GenomiqueENS / dockerfiles
  ☆82Updated 3 years ago
• bionitio-team / bionitio
  Demonstrating best practices for bioinformatics command line tools
  ☆116Updated 5 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆80Updated 10 months ago
• statgen / gotcloud
  Genomes on the Cloud, Mapping & Variant Calling Pipelines
  ☆33Updated 8 years ago
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆83Updated this week
• nextflow-io / nf-hack18
  Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/
  ☆19Updated 6 years ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆23Updated 3 years ago
• fls-bioinformatics-core / genomics
  Scripts, utilities and programs for genomic bioinformatics.
  ☆83Updated 2 months ago
• Ensembl / ensembl-tools
  Ensembl tools
  ☆34Updated 3 months ago
• WilsonSayresLab / BioinformaticsIntroduction
  ☆29Updated 5 years ago
• galaxyproject / cargo-port
  cache packages permanently
  ☆15Updated 3 months ago
• biocorecrg / BioNextflow
  A collection of modules and sub-workflows for Nextflow
  ☆28Updated this week
• genome / analysis-workflows
  Open workflow definitions for genomic analysis from MGI at WUSM.
  ☆104Updated 7 months ago
• BioinformaticsSpring2015 / BioinformaticsMaterials
  Syllabus and materials for bioinformatics lecture + lab
  ☆21Updated 10 years ago
• NCI-GDC / gdc-dnaseq-cwl
  CWL for GDC DNASeq workflows
  ☆23Updated last week
• nextflow-io / rmghc-2018
  Nextflow Workshop at Rocky Mountain Genomics HackCon 2018
  ☆10Updated 7 years ago
• grst / snakemake_nextflow_wdl
  simple comparison of snakemake, nextflow and cromwell/wdl
  ☆50Updated 5 years ago
• MultiQC / test-data
  Test data for MultiQC.
  ☆24Updated last month
• s-andrews / BamQC
  Mapped QC analysis program
  ☆43Updated 7 years ago
• ccmbioinfo / crg2
  Research pipeline for exploring clinically relevant genomic variants
  ☆16Updated last week
• nf-core / tower-action
  GitHub Action to launch a workflow using Nextflow Tower.
  ☆12Updated 2 years ago
• biocommons / uta
  Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…
  ☆71Updated 3 months ago
• dnanexus-archive / samtools
  ☆30Updated 9 years ago
• dancooke / starfish
  Intersect multiple VCF files with haplotype awareness
  ☆26Updated 4 years ago