☆13Apr 2, 2025Updated 11 months ago
Alternatives and similar repositories for fasp-scripts
Users that are interested in fasp-scripts are comparing it to the libraries listed below
Sorting:
- Reference server implementation for the GA4GH HTSget API standard.☆12May 11, 2023Updated 2 years ago
- A talk on Makesfiles in bioinformatics☆26Jul 18, 2013Updated 12 years ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 6 years ago
- The WES API is a standard way to run and manage portable workflows.☆90Feb 20, 2026Updated last month
- RNA-seq workflow for Snakemake based on STAR and featureCounts.☆23May 25, 2019Updated 6 years ago
- Example package that uses shinytest to test application created by a function☆16Mar 29, 2018Updated 7 years ago
- Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang☆31Apr 20, 2020Updated 5 years ago
- Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org☆13Updated this week
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Sep 17, 2023Updated 2 years ago
- Python OncoPrint library based on Matplotlib☆25Sep 23, 2025Updated 5 months ago
- ☆18Jan 24, 2018Updated 8 years ago
- Prioritize structural variants based on CADD scores☆29May 7, 2020Updated 5 years ago
- ☆14Oct 9, 2025Updated 5 months ago
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22Mar 13, 2026Updated last week
- Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit☆14May 28, 2025Updated 9 months ago
- Computes various SV statistics☆14Oct 12, 2023Updated 2 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- Cypress with coverage reports☆13Aug 23, 2018Updated 7 years ago
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆80Mar 25, 2025Updated 11 months ago
- CWL experimental grammar☆11Nov 16, 2025Updated 4 months ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Nov 7, 2025Updated 4 months ago
- The BioPerl Web site: http://bioperl.org☆14Aug 29, 2019Updated 6 years ago
- Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows☆14Jun 27, 2018Updated 7 years ago
- Documentation for Quay.io☆17Feb 12, 2020Updated 6 years ago
- Fork of the canopy clustering algorithm of Nielsen et al.☆11Sep 9, 2016Updated 9 years ago
- A pipeline for for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets☆31Nov 9, 2025Updated 4 months ago
- Docker for Bioinformatics☆20Mar 2, 2026Updated 2 weeks ago
- REST API for uploading/downloading files for Invenio.☆11Mar 12, 2026Updated last week
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- Simple way to create ebooks from a set of markdown files.☆18Apr 7, 2016Updated 9 years ago
- ☆20Feb 18, 2025Updated last year
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆25Mar 12, 2026Updated last week
- Nextflow hackathon 2017 projects☆10Sep 28, 2017Updated 8 years ago
- Ten Simple Rules for Making Research Software More Robust. Manuscript is published at PLoS Computational Biology. Feedback is welcome!☆12Apr 17, 2017Updated 8 years ago
- SPecies level IdentificatioN of metaGenOmic amplicons☆11Apr 11, 2018Updated 7 years ago
- Experiment with github actions on a Nim project☆10Apr 23, 2020Updated 5 years ago
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)☆22Aug 28, 2019Updated 6 years ago
- Genome Annotation Library - A perl toolkit for working with SO compliant genome annotations☆17Feb 5, 2025Updated last year
- This is a generic Python client for BioThings APIs☆19Updated this week